RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TVP23BQ9NYZ1 205 aa7.18□□□□□ -1.26
TPM3-201ENST00000271850 MTCH1Q9NZJ7 389 aa7.18□□□□□ -1.26
TPM3-201ENST00000271850 OR14J1Q9UGF5 321 aa7.18□□□□□ -1.26
TPM3-201ENST00000271850 ENPP5Q9UJA9 477 aa7.18□□□□□ -1.26
TPM3-201ENST00000271850 FAM90A22PA8MWA6 464 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 H3BSH0 61 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 K7EIL1 84 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 DLGAP1O14490 977 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 PSPNO60542 156 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 MITFO75030 526 aaPredicted RBP7.17□□□□□ -1.26
TPM3-201ENST00000271850 NXPH2O95156 264 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 ARG1P05089 322 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 HMGN1P05114 100 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 IGHV1-8P0DP01 117 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 CRISP1P54107 249 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 CXCR4P61073 352 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 IL24Q13007 206 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 CNN3Q15417 329 aaKnown RBP7.17□□□□□ -1.26
TPM3-201ENST00000271850 UBE2V2Q15819 145 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 SSX2Q16385 188 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 CLVS2Q5SYC1 327 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 ZNF684Q5T5D7 378 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 FAHD1Q6P587 224 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 ZNF322Q6U7Q0 402 aaPredicted RBP7.17□□□□□ -1.26
TPM3-201ENST00000271850 ASRGL1Q7L266 308 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 RNF144BQ7Z419 303 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 COMMD2Q86X83 199 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 NDUFA11Q86Y39 141 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 ZDHHC13Q8IUH4 622 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 OR52N4Q8NGI2 321 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 TRMT10AQ8TBZ6 339 aaKnown RBP7.17□□□□□ -1.26
TPM3-201ENST00000271850 CADM1Q9BY67 442 aaKnown RBP7.17□□□□□ -1.26
TPM3-201ENST00000271850 MROQ9BYG7 248 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 RAB18Q9NP72 206 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 NECAP2Q9NVZ3 263 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 OR52A1Q9UKL2 312 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 TBL2Q9Y4P3 447 aaKnown RBP7.17□□□□□ -1.26
TPM3-201ENST00000271850 R4GMQ9 66 aa7.17□□□□□ -1.26
TPM3-201ENST00000271850 TCRBV3S1A0A5B6 114 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 AQP12BA6NM10 295 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 SLC1A7O00341 560 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 ATP8B1O43520 1251 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 FKBP6O75344 327 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 ZNF254O75437 659 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 AMY1AP04745 511 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 AMY2AP04746 511 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 ZNF728P0DKX0 622 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 IGLL1P15814 213 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 CALB2P22676 271 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 GDNFP39905 211 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 DYNLT3P51808 116 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 RIDAP52758 137 aaKnown RBP7.16□□□□□ -1.26
TPM3-201ENST00000271850 LOXL3P58215 753 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 KRTAP10-11P60412 298 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 CD83Q01151 205 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 PTGES3Q15185 160 aaKnown RBP7.16□□□□□ -1.26
TPM3-201ENST00000271850 SNAPC1Q16533 368 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 ZNF829Q3KNS6 432 aaPredicted RBP7.16□□□□□ -1.26
TPM3-201ENST00000271850 C11orf87Q6NUJ2 197 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 KCTD18Q6PI47 426 aaPredicted RBP7.16□□□□□ -1.26
TPM3-201ENST00000271850 ZNF573Q86YE8 665 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 AQP12AQ8IXF9 295 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 SLC35F2Q8IXU6 374 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 WFDC9Q8NEX5 89 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 OR4P4Q8NGL7 312 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 ASB17Q8WXJ9 295 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 UTP4Q969X6 686 aaKnown RBP7.16□□□□□ -1.26
TPM3-201ENST00000271850 SLAMF9Q96A28 289 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 R3HDM4Q96D70 268 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 MALSU1Q96EH3 234 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 CNN2Q99439 309 aaKnown RBP7.16□□□□□ -1.26
TPM3-201ENST00000271850 PKIBQ9C010 78 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 C1orf21Q9H246 121 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 DNAJB9Q9UBS3 223 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 IKZF2Q9UKS7 526 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 TENM3Q9P273 2699 aa7.16□□□□□ -1.26
TPM3-201ENST00000271850 IGHV2-26A0A0B4J1V2 119 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 IGKV1-9A0A0C4DH69 117 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 SH2D7A6NKC9 451 aaPredicted RBP7.15□□□□□ -1.26
TPM3-201ENST00000271850 LOC110117498-PIK3R3F6TDL0 507 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 INMTO95050 263 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 APOL3O95236 402 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 RBP4P02753 201 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 CALCBP10092 127 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ANXA8P13928 327 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 CD24P25063 80 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 NPBWR2P48146 333 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 MNAT1P51948 309 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 LGALS4P56470 323 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ACTA2P62736 377 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ACTG2P63267 376 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ACTC1P68032 377 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ACTA1P68133 377 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 CBX1P83916 185 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ODF4Q2M2E3 257 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 SLX4IPQ5VYV7 408 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 C12orf73Q69YU5 71 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 MEPCEQ7L2J0 689 aaKnown RBP7.15□□□□□ -1.26
TPM3-201ENST00000271850 REC114Q7Z4M0 266 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 CATSPERDQ86XM0 798 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms