RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MICBQ29980 383 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 SMIM21Q3B7S5 101 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 FAM201AQ5SY85 155 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 DCDC5Q6ZRR9 648 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 TNFAIP8L1Q8WVP5 186 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 TMEM246Q9BRR3 403 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 RNF167Q9H6Y7 350 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 PCDHB16Q9NRJ7 776 aa11.93□□□□□ -0.5
SSBP1-201ENST00000265304 AK6Q9Y3D8 172 aaKnown RBP11.93□□□□□ -0.5
SSBP1-201ENST00000265304 IGKV1D-17A0A075B6S4 117 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 LOC100506127A0A0U1RQW1 187 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 NOTOA8MTQ0 251 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 TRAPPC2LH3BP13 241 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 AIPO00170 330 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 WNT9BO14905 357 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 ANGPTL7O43827 346 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 WNT2P09544 360 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 PSG2P11465 335 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 BCL3P20749 454 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 GLRA1P23415 457 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 HTR2CP28335 458 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
SSBP1-201ENST00000265304 POU3F4P49335 361 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 CAPZA1P52907 286 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 DGUOKQ16854 277 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 SPIN3Q5JUX0 258 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 GPR107Q5VW38 600 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 ZNF788Q6ZQV5 615 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 SATL1Q86VE3 508 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 FAM58AQ8N1B3 248 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 SPICQ8N5J4 248 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 JAGN1Q8N5M9 183 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 RAB2BQ8WUD1 216 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 RFT1Q96AA3 541 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 SDSLQ96GA7 329 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 Q96MF0 132 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 ZNF488Q96MN9 340 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 GPER1Q99527 375 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 REG4Q9BYZ8 158 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 NAA50Q9GZZ1 169 aaKnown RBP11.92□□□□□ -0.5
SSBP1-201ENST00000265304 IFT22Q9H7X7 185 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 PATZ1Q9HBE1 687 aaKnown RBP11.92□□□□□ -0.5
SSBP1-201ENST00000265304 SMURF1Q9HCE7 757 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 NLKQ9UBE8 527 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 MRPS28Q9Y2Q9 187 aaKnown RBP11.92□□□□□ -0.5
SSBP1-201ENST00000265304 POLR3KQ9Y2Y1 108 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-201ENST00000265304 CEPT1Q9Y6K0 416 aa11.92□□□□□ -0.5
SSBP1-201ENST00000265304 IGHV4-61A0A0C4DH41 118 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 OR2AT4A6NND4 320 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 TMEM14DPA8MWL7 114 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 BPNT1O95861 308 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 USF1P22415 310 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-201ENST00000265304 RPS19P39019 145 aaKnown RBP11.91□□□□□ -0.5
SSBP1-201ENST00000265304 SCAND1P57086 179 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 OR10A3P58181 314 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-201ENST00000265304 ZNF841Q6ZN19 808 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 CROCCP3Q8IVE0 287 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 OR5D18Q8NGL1 313 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 PTX4Q96A99 478 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 SEH1LQ96EE3 360 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 RBFOX1Q9NWB1 397 aaKnown RBP11.91□□□□□ -0.5
SSBP1-201ENST00000265304 MIOXQ9UGB7 285 aa11.91□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A10PA6NDY2 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A18PA6NE21 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A16PA6NEW6 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A20PA6NIJ5 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A8PA6NJQ4 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A7PA6NKC0 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 CEACAM18A8MTB9 384 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A22PA8MWA6 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A12PA8MX19 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A5PA8MXJ8 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A23PA8MXZ1 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 NXPH2O95156 264 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 CDRT1O95170 752 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 IGHV2-5P01817 119 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A15PP0C7V4 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A13PP0C7W8 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A14PP0C7W9 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM90A24PP0C7X0 464 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 CD80P33681 288 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 NCS1P62166 190 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 DYNC1I2Q13409 638 aaKnown RBP11.9□□□□□ -0.5
SSBP1-201ENST00000265304 IL13RA2Q14627 380 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 GLIPR1L1Q6UWM5 242 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 OR2W3Q7Z3T1 314 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 FAM89BQ8N5H3 189 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 KCNG3Q8TAE7 436 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 SLC25A46Q96AG3 418 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 DMRTB1Q96MA1 342 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 NDUFA13Q9P0J0 144 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 STEAP1Q9UHE8 339 aa11.9□□□□□ -0.5
SSBP1-201ENST00000265304 SONP18583 2426 aaKnown RBP11.9□□□□□ -0.5
SSBP1-201ENST00000265304 A8MXK9 166 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 C3orf80F5H4A9 247 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms