RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LOC100130705A0A1B0GUX0 176 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 OR4C45A6NMZ5 311 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 INMTO95050 263 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 PAHP00439 452 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 DBTP11182 482 aaKnown RBP13.12□□□□□ -0.31
USE1-201ENST00000263897 ATF1P18846 271 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 ACTA2P62736 377 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 ACTG2P63267 376 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 COL10A1Q03692 680 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 ZNF91Q05481 1191 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 MIDNQ504T8 468 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 OLFML2AQ68BL7 652 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 MKXQ8IYA7 352 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 MRPL48Q96GC5 212 aaKnown RBP13.12□□□□□ -0.31
USE1-201ENST00000263897 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 MYCBPQ99417 103 aaPredicted RBP13.12□□□□□ -0.31
USE1-201ENST00000263897 SEBOXQ9HB31 216 aaPredicted RBP13.12□□□□□ -0.31
USE1-201ENST00000263897 AMBNQ9NP70 447 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 HHLA2Q9UM44 414 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 MYRFQ9Y2G1 1151 aa13.12□□□□□ -0.31
USE1-201ENST00000263897 DSCAML1Q8TD84 2053 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 hCG_1809904A0A1W2PP81 198 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 A0A1W2PPE2 198 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 A0A1W2PR64 198 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 A0A1W2PRV1 198 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 ANGPTL7O43827 346 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 ZNF737O75373 536 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 FADS2O95864 444 aaKnown RBP13.11□□□□□ -0.31
USE1-201ENST00000263897 ZNF20P17024 532 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 PRKACBP22694 351 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 MTCP1P56278 107 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
USE1-201ENST00000263897 SYS1Q8N2H4 156 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 ASCC1Q8N9N2 400 aaKnown RBP13.11□□□□□ -0.31
USE1-201ENST00000263897 BEND2Q8NDZ0 799 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 OR10AC1Q8NH08 325 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 AJUBAQ96IF1 538 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 ZNF649Q9BS31 505 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
USE1-201ENST00000263897 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
USE1-201ENST00000263897 MRPS18AQ9NVS2 196 aaKnown RBP13.11□□□□□ -0.31
USE1-201ENST00000263897 BTBD17A6NE02 478 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 BAG2O95816 211 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 IGHA1P01876 353 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 CCL3L1P16619 93 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 AZGP1P25311 298 aaKnown RBP13.1□□□□□ -0.31
USE1-201ENST00000263897 NPBWR2P48146 333 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 RAB40BQ12829 278 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 ZNF273Q14593 569 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 Q8IYB0 196 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 ZSCAN4Q8NAM6 433 aaPredicted RBP13.1□□□□□ -0.31
USE1-201ENST00000263897 OR51A4Q8NGJ6 313 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 OR5R1Q8NH85 324 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 LINC01006Q8NI28 216 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 C17orf50Q8WW18 174 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 SNX22Q96L94 193 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 INPP5EQ9NRR6 644 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 ERVK13-1Q9NX77 482 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
USE1-201ENST00000263897 RPL36Q9Y3U8 105 aaKnown RBP13.1□□□□□ -0.31
USE1-201ENST00000263897 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 C17orf98A8MV24 154 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 CYB5AP00167 134 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
USE1-201ENST00000263897 POU3F4P49335 361 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 DLX6P56179 175 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 PDZK1IP1Q13113 114 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 C17orf107Q6ZR85 190 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 LHFPL2Q6ZUX7 228 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 GDPD3Q7L5L3 318 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 OR8H2Q8N162 312 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 FAM58AQ8N1B3 248 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 OR13C3Q8NGS6 347 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 EMG1Q92979 244 aaKnown RBP13.09□□□□□ -0.31
USE1-201ENST00000263897 SPSB1Q96BD6 273 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 OPALINQ96PE5 141 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 RNF114Q9Y508 228 aa13.09□□□□□ -0.31
USE1-201ENST00000263897 TRBV2A0A0J9YWF9 115 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 E9PI62 339 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 HAND1O96004 215 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 MT-ND2P03891 347 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 RPSAP08865 295 aaKnown RBP13.08□□□□□ -0.32
USE1-201ENST00000263897 BCL3P20749 454 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 TGFBR2P37173 567 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 EDDM3BP56851 147 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 MEF2CQ06413 473 aaPredicted RBP13.08□□□□□ -0.32
USE1-201ENST00000263897 SRSF4Q08170 494 aaKnown RBP13.08□□□□□ -0.32
USE1-201ENST00000263897 LPCAT4Q643R3 524 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 Q6ZSV7 163 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 OR52N4Q8NGI2 321 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 OR52I1Q8NGK6 324 aa13.08□□□□□ -0.32
USE1-201ENST00000263897 APH1BQ8WW43 257 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms