RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TMEM17Q86X19 198 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 ZNF251Q9BRH9 671 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 VSIG4Q9Y279 399 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 hCG_38984A0A1B0GV85 526 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 SDCBPO00560 298 aaPredicted RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 PRAF2O60831 178 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 LRP3O75074 770 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 SELLP14151 372 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 NFYBP25208 207 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 AGTR1P30556 359 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 RPS27AP62979 156 aaKnown RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 TAF9Q16594 264 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 KRTAP27-1Q3LI81 207 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 OR2W3Q7Z3T1 314 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 SPICQ8N5J4 248 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 ZNF75AQ96N20 296 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 PDCD10Q9BUL8 212 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 CST11Q9H112 138 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 ZDHHC11Q9H8X9 412 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 ATMQ13315 3056 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 OR2AT4A6NND4 320 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 EFSO43281 561 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 OR2A4O95047 310 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 SNTB1Q13884 538 aaKnown RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 SPATA46Q5T0L3 261 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 C11orf88Q6PI97 169 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 OR2A7Q96R45 310 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 URM1Q9BTM9 101 aaKnown RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 WDR13Q9H1Z4 485 aa11.74□□□□□ -0.53
VMP1-201ENST00000262291 BARX1Q9HBU1 254 aaPredicted RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 GPN1Q9HCN4 374 aaPredicted RBP11.74□□□□□ -0.53
VMP1-201ENST00000262291 IGKV1-12A0A0C4DH73 117 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 ZNF724A8MTY0 619 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 ZNF205O95201 554 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 IL18BPO95998 194 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 IGKV1D-12P01611 117 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 RNF224P0DH78 156 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 PI3P19957 117 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 NPBWR1P48145 328 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 CAPZA1P52907 286 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 RNPS1Q15287 305 aaKnown RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 RSU1Q15404 277 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 MICBQ29980 383 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 OR56B2PQ8NGI1 322 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 OR4K15Q8NH41 348 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 BORCS8Q96FH0 119 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 TMPRSS13Q9BYE2 586 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 TMEM231Q9H6L2 316 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 STARD10Q9Y365 291 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 FAM221AA4D161 298 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 OR14I1A6ND48 311 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 TXNL1O43396 289 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 CD74P04233 296 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 CHRM2P08172 466 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 MELTFP08582 738 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 LUMP51884 338 aaPredicted RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 SRSF3P84103 164 aaKnown RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 AKIRIN2Q53H80 203 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 C9orf152Q5JTZ5 239 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 SVBPQ8N300 66 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 CNEP1R1Q8N9A8 125 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 ADAD2Q8NCV1 583 aaKnown RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 OR56B1Q8NGI3 324 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 PAPOLGQ9BWT3 736 aaKnown RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 FBLN5Q9UBX5 448 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 MFNGO00587 321 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 SNAPINO95295 136 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 CELA3BP08861 270 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 MPGP29372 298 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 MYPOPQ86VE0 399 aaPredicted RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 CALHM1Q8IU99 346 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 OR1S2Q8NGQ3 325 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 PECRQ9BY49 303 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 ZNF701Q9NV72 531 aaPredicted RBP11.73□□□□□ -0.53
VMP1-201ENST00000262291 ASF1BQ9NVP2 202 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 GHRLQ9UBU3 117 aa11.73□□□□□ -0.53
VMP1-201ENST00000262291 IGKV1D-8A0A087WSZ0 117 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 UBE2QL1A1L167 161 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 CCSO14618 274 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 LILRA1O75019 489 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 LYZL6O75951 148 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 IFNA6P05013 189 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 IFNA4P05014 189 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 IL5P05113 134 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 OR4E1P0C645 316 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 NPY4RP50391 375 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 SSBP1Q04837 148 aaKnown RBP11.72□□□□□ -0.53
VMP1-201ENST00000262291 PDZK1IP1Q13113 114 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 ASCL5Q7RTU5 278 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 FAAP24Q9BTP7 215 aa11.72□□□□□ -0.53
VMP1-201ENST00000262291 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms