RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FZD2Q14332 565 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 LY6G6FQ5SQ64 297 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 SLC25A43Q8WUT9 341 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-201ENST00000261646 AQP10Q96PS8 301 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 PARD6AQ9NPB6 346 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 PTRH2Q9Y3E5 179 aaKnown RBP14.34□□□□□ -0.11
SREBF1-201ENST00000261646 MED12Q93074 2177 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 CXorf65A6NEN9 183 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 OPN1MWP04001 364 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 OPN1MW2P0DN77 364 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 OPN1MW3P0DN78 364 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 ATP6V0CP27449 155 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 DDTP30046 118 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 GALR1P47211 349 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 P2RY1P47900 373 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 MMP16P51512 607 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 CYB561D1Q8N8Q1 229 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 OR2AE1Q8NHA4 323 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 OXGR1Q96P68 337 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 TREM2Q9NZC2 230 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 HS3ST3A1Q9Y663 406 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 SIP14410 1827 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 A0A1W2PNV4 684 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 KLK2P20151 261 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 COL9A1P20849 921 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 OTX2P32243 289 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 ZNF880Q6PDB4 577 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 PTX4Q96A99 478 aa14.34□□□□□ -0.11
SREBF1-201ENST00000261646 C8orf33Q9H7E9 229 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-201ENST00000261646 MRPL33O75394 65 aaKnown RBP14.33□□□□□ -0.12
SREBF1-201ENST00000261646 GAPDHP04406 335 aaKnown RBP14.33□□□□□ -0.12
SREBF1-201ENST00000261646 UBE2G2P60604 165 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 MRPS21P82921 87 aaKnown RBP14.33□□□□□ -0.12
SREBF1-201ENST00000261646 SLC35G3Q8N808 338 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 IL22RA2Q969J5 263 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 RNF212BA8MTL3 300 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 DHHO43323 396 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 CTXN2P0C2S0 81 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 CHRNA7P36544 502 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 CDX1P47902 265 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-201ENST00000261646 KRTDAPP60985 99 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 KIF26BQ2KJY2 2108 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 ZNF385CQ66K41 422 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-201ENST00000261646 NOXO1Q8NFA2 376 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 C8orf44Q96CB5 159 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 C3orf85A0A1B0GTC6 90 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 MAP1LC3B2A6NCE7 125 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 SCRG1O75711 98 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 APLNRP35414 380 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 CAPZBP47756 277 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 DYNLT3P51808 116 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 EWSR1Q01844 656 aaKnown RBP eCLIP14.33□□□□□ -0.128e-7■■■■□ 22.1
SREBF1-201ENST00000261646 FAM58AQ8N1B3 248 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 SLC26A10Q8NG04 563 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 OR10A7Q8NGE5 316 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 OR2I1PQ8NGU4 316 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 MAP1LC3BQ9GZQ8 125 aa14.33□□□□□ -0.12
SREBF1-201ENST00000261646 ESRP2Q9H6T0 727 aaKnown RBP14.33□□□□□ -0.12
SREBF1-201ENST00000261646 H0YL77 283 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 ASAH2BP0C7U1 165 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 PGA3P0DJD8 388 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 HKR1P10072 659 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 PPP1CCP36873 323 aaKnown RBP14.32□□□□□ -0.12
SREBF1-201ENST00000261646 CARD18P57730 90 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 LIAT1Q6ZQX7 453 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 Q6ZS52 159 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 LRP11Q86VZ4 500 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 HDHD3Q9BSH5 251 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-201ENST00000261646 C5orf66Q9H5L9 145 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 HEYLQ9NQ87 328 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-201ENST00000261646 J3QRE1 110 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 DVL1O14640 695 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 RNF224P0DH78 156 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 FUT3P21217 361 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 RPS16P62249 146 aaKnown RBP14.32□□□□□ -0.12
SREBF1-201ENST00000261646 DMBX1Q8NFW5 382 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 OR13G1Q8NGZ3 307 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 SPSB2Q99619 263 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 ACTR3CQ9C0K3 210 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-201ENST00000261646 SLC2A9Q9NRM0 540 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 PITPNC1Q9UKF7 332 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 DOCK4Q8N1I0 1966 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 ZNF217O75362 1048 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 TTRP02766 147 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 HOXB1P14653 301 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-201ENST00000261646 GPR3P46089 330 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 ACOT6Q3I5F7 207 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-201ENST00000261646 SIGLECL1Q8N7X8 197 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 ZNF586Q9NXT0 402 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 IL17BQ9UHF5 180 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 TRAPPC1Q9Y5R8 145 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 AUP1Q9Y679 476 aa14.32□□□□□ -0.12
SREBF1-201ENST00000261646 IGHV3-64DA0A0J9YX35 117 aa14.31□□□□□ -0.12
SREBF1-201ENST00000261646 UBE2L5PA0A1B0GUS4 154 aa14.31□□□□□ -0.12
SREBF1-201ENST00000261646 CLEC18AA5D8T8 446 aa14.31□□□□□ -0.12
SREBF1-201ENST00000261646 MGST1P10620 155 aaKnown RBP14.31□□□□□ -0.12
SREBF1-201ENST00000261646 PNRC1Q12796 327 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-201ENST00000261646 VAX1Q5SQQ9 334 aa14.31□□□□□ -0.12
SREBF1-201ENST00000261646 LHFPL2Q6ZUX7 228 aa14.31□□□□□ -0.12
SREBF1-201ENST00000261646 CLEC18CQ8NCF0 446 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms