RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 VAMP3Q15836 100 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 VN1R4Q7Z5H5 301 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 OR8B12Q8NGG6 310 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 TMEM18Q96B42 140 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 RAB18Q9NP72 206 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 SHANK3Q9BYB0 1731 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 IGHA1P01876 353 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 IGHA2P01877 340 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 MVDP53602 400 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 PJVKQ0ZLH3 352 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 XAF1Q6GPH4 301 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 ARRDC1Q8N5I2 433 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 OR1B1Q8NGR6 318 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 PRR7Q8TB68 274 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 NOL4LQ96MY1 436 aaPredicted RBP10.73□□□□□ -0.69
COL8A1-201ENST00000261037 PECRQ9BY49 303 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 K7ESF4 209 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 PLPP2O43688 288 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 FGF2P09038 288 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 ORM2P19652 201 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 GGNBP1Q5YKI7 109 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF788Q6ZQV5 615 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 NHLRC2Q8NBF2 726 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 ALG14Q96F25 216 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 CXXC4Q9H2H0 198 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 MSL2Q9HCI7 577 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 LHX9Q9NQ69 397 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 HRASP01112 189 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 FBP1P09467 338 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 TUSC5Q8IXB3 177 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 UQCC2Q9BRT2 126 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 IGFBP7Q16270 282 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 TMEM108Q6UXF1 575 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF683Q8IZ20 524 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 TCTE3Q8IZS6 198 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 GPR137Q96N19 417 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 CHRDL1Q9BU40 450 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 PARD6AQ9NPB6 346 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF275Q9NSD4 429 aaPredicted RBP10.73□□□□□ -0.69
COL8A1-201ENST00000261037 DCAF16Q9NXF7 216 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 CROCCQ5TZA2 2017 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 PRSS44E7EML9 344 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 HRKO00198 91 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 APELAP0DMC3 54 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 MDH2P40926 338 aaKnown RBP10.72□□□□□ -0.69
COL8A1-201ENST00000261037 ZDHHC22Q8N966 263 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 OR10AC1Q8NH08 325 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 TRAPPC4Q9Y296 219 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 KIAA0100Q14667 2235 aaKnown RBP10.72□□□□□ -0.69
COL8A1-201ENST00000261037 SPP1P10451 314 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 CCL4P13236 92 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 TSPO2Q5TGU0 170 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 MMP7P09237 267 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-201ENST00000261037 GZMKP49863 264 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 DHRS2Q13268 280 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 EIF3IQ13347 325 aaKnown RBP10.72□□□□□ -0.69
COL8A1-201ENST00000261037 C1QL3Q5VWW1 255 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 TMEM65Q6PI78 240 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 OR8D4Q8NGM9 314 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 WDR61Q9GZS3 305 aaKnown RBP10.72□□□□□ -0.69
COL8A1-201ENST00000261037 NAA60Q9H7X0 242 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-201ENST00000261037 SIRT3Q9NTG7 399 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-201ENST00000261037 IL36GQ9NZH8 169 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 ADAMTSL1Q8N6G6 1762 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 TMPRSS2O15393 492 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF737O75373 536 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 RNF224P0DH78 156 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 PNLIPP16233 465 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 RTP5Q14D33 572 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 PCED1AQ9H1Q7 454 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 COA4Q9NYJ1 87 aa10.72□□□□□ -0.69
COL8A1-201ENST00000261037 KCNJ3P48549 501 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 GNG4P50150 75 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 CD226Q15762 336 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 SLIRPQ9GZT3 109 aaKnown RBP10.71□□□□□ -0.69
COL8A1-201ENST00000261037 RASL12Q9NYN1 266 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 IGHV3OR15-7A0A075B7D8 119 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 KIAA1324LA8MWY0 1029 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-201ENST00000261037 SRD5A2P31213 254 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 RPL13AP40429 203 aaKnown RBP10.71□□□□□ -0.69
COL8A1-201ENST00000261037 CDC34P49427 236 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-201ENST00000261037 MOGAT2Q3SYC2 334 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 MESTQ5EB52 335 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 VPS25Q9BRG1 176 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 CDX4O14627 284 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-201ENST00000261037 SP1P08047 785 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 PRRX1P54821 245 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 COL19A1Q14993 1142 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 MOB1BQ7L9L4 216 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 RBM14Q96PK6 669 aaKnown RBP10.71□□□□□ -0.69
COL8A1-201ENST00000261037 C12orf57Q99622 126 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 C19orf43Q9BQ61 176 aa10.71□□□□□ -0.69
COL8A1-201ENST00000261037 ARID1BQ8NFD5 2236 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-201ENST00000261037 PHOX2AO14813 284 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 RAB7AP51149 207 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms