RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TRPM6Q9BX84 2022 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 LRRC3CA6NJW4 275 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 KCNAB3O43448 404 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 PLPP2O43688 288 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 FCGR2CP31995 323 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ETV1P50549 477 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 LAMTOR1Q6IAA8 161 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC25A47Q6Q0C1 308 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 OR4F17Q8NGA8 305 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 OR4F5Q8NH21 305 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 OR4F4Q96R69 305 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 CHST5Q9GZS9 411 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 IL36GQ9NZH8 169 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 TRDCB7Z8K6 153 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 HAX1O00165 279 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 CORTO00230 105 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC9A3R2Q15599 337 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ATP6V1FQ16864 119 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 GPR32P1Q8NGA4 272 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 SEC22CQ9BRL7 303 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ELOVL1Q9BW60 279 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ASF1BQ9NVP2 202 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 METRNQ9UJH8 293 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 PCYT1BQ9Y5K3 369 aaPredicted RBP11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 SPINK2P20155 84 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 RPS4Y1P22090 263 aaKnown RBP11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ISL1P61371 349 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 HSD17B13Q7Z5P4 300 aaPredicted RBP11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC35D1Q9NTN3 355 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 FLRT3Q9NZU0 649 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 MS4A18H0YCH9 400 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ONECUT2O95948 504 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 MS4A18Q3C1V0 323 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 OR4A4PQ8NGN8 299 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 FAM216AQ8WUB2 273 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ST8SIA2Q92186 375 aa11.75□□□□□ -0.53
PRPF38A-201ENST00000257181 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 H3BMQ9 156 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 PRKNO60260 465 aaPredicted RBP11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 CTLA4P16410 223 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 FMODQ06828 376 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 IAH1Q2TAA2 248 aaPredicted RBP11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 LINC00271P0C7V0 271 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 CEACAM6P40199 344 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 UBE2G1P62253 170 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 MESTQ5EB52 335 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 FAM219AQ8IW50 185 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 PHC2Q8IXK0 858 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 CCL27Q9Y4X3 112 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 FXYD1O00168 92 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 NDUFS8O00217 210 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 ADAM5Q6NVV9 412 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 SUMF1Q8NBK3 374 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 DUSP18Q8NEJ0 188 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 RPS4Y2Q8TD47 263 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 GPR27Q9NS67 375 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 TNFSF8P32971 234 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 RPL31P62899 125 aaKnown RBP11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC35A2P78381 396 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 CCBE1Q6UXH8 406 aaPredicted RBP11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 OR8B12Q8NGG6 310 aa11.74□□□□□ -0.53
PRPF38A-201ENST00000257181 RAB27BO00194 218 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 WDR38Q5JTN6 314 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 PIP4P1Q86T03 277 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 MFFQ9GZY8 342 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 NTN4Q9HB63 628 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 CHCHD2Q9Y6H1 151 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 MYO18AQ92614 2054 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ARG1P05089 322 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 PGA4P0DJD7 388 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 HIST1H1DP16402 221 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 CDKN2AP42771 156 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 NUP37Q8NFH4 326 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 OR4Q3Q8NH05 313 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 PTX4Q96A99 478 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 FZR1Q9UM11 496 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 HLA-DOBP13765 273 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 CD40P25942 277 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 GABRA4P48169 554 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 PSMB3P49720 205 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 TMEM33P57088 247 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 NAAAQ02083 359 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 IGFL3Q6UXB1 125 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ZNF485Q8NCK3 441 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC26A10Q8NG04 563 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ARPC5LQ9BPX5 153 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 SHROOM3Q8TF72 1996 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ZNF729A6NN14 1252 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 HIST1H1BP16401 226 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ACAA2P42765 397 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms