RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ANKRD34CP0C6C1 535 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 SPP1P10451 314 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 SFTPCP11686 197 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 RAC3P60763 192 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 TNXAQ16473 311 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 SP6Q3SY56 376 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 ATG4DQ86TL0 474 aaPredicted RBP7.71□□□□□ -1.17
PTCD3-201ENST00000254630 OR5M8Q8NGP6 311 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 PTPMT1Q8WUK0 201 aaPredicted RBP7.71□□□□□ -1.17
PTCD3-201ENST00000254630 PTP4A1Q93096 173 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 TNS1Q9HBL0 1735 aaKnown RBP7.71□□□□□ -1.17
PTCD3-201ENST00000254630 XIRP1Q702N8 1843 aaKnown RBP7.71□□□□□ -1.17
PTCD3-201ENST00000254630 PATE3B3GLJ2 98 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 HYAL3O43820 417 aaPredicted RBP7.71□□□□□ -1.17
PTCD3-201ENST00000254630 OR2M3Q8NG83 312 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 BLNKQ8WV28 456 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 SEBOXQ9HB31 216 aaPredicted RBP7.71□□□□□ -1.17
PTCD3-201ENST00000254630 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.71□□□□□ -1.17
PTCD3-201ENST00000254630 RFPL4AA6NLU0 287 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TRDCB7Z8K6 153 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 RFPL4AL1F8VTS6 287 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 SPINT1O43278 529 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 SFTA3P0C7M3 94 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 WDR31Q8NA23 367 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 OR1L4Q8NGR5 311 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 NTNG2Q96CW9 530 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 WDR89Q96FK6 387 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-201ENST00000254630 OR2H1Q9GZK4 316 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 WDR54Q9H977 334 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 UQCC1Q9NVA1 299 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 CLEC5AQ9NY25 188 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 STARD10Q9Y365 291 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TMED3Q9Y3Q3 217 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1B0GTH9 108 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TUBAL3A6NHL2 446 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 DEGS2Q6QHC5 323 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 SPNS3Q6ZMD2 512 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 UBE3DQ7Z6J8 389 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 MOGAT3Q86VF5 341 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 CA10Q9NS85 328 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 NAGKQ9UJ70 344 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1W2PN81 502 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1W2PPV9 198 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF320A2RRD8 509 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TGOLN2O43493 480 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 NDUFB6O95139 128 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 EML2O95834 649 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TXNDC12O95881 172 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 CCL3P10147 92 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 CHRNA7P36544 502 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 SCAND1P57086 179 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 CCDC190Q86UF4 302 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 SFTPA2Q8IWL1 248 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TCTE3Q8IZS6 198 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 BCL2L2Q92843 193 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-201ENST00000254630 TRAPPC4Q9Y296 219 aa7.71□□□□□ -1.18
PTCD3-201ENST00000254630 F2RL2O00254 374 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CD37P11049 281 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 TIAL1Q01085 375 aaKnown RBP eCLIP7.7□□□□□ -1.182e-6■■■■□ 19.7
PTCD3-201ENST00000254630 CFHR5Q9BXR6 569 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 KCNK15Q9H427 330 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 GPR35Q9HC97 309 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 PDCD6O75340 191 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CST7O76096 145 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CD160O95971 181 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 LIFP15018 202 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CD96P40200 585 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 LYZP61626 148 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 SKP2Q13309 424 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CD226Q15762 336 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 BAP18Q8IXM2 172 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 OR1B1Q8NGR6 318 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 VSTM2LQ96N03 204 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 COL4A5P29400 1685 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 IGHV3OR15-7A0A075B7D8 119 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 LY86O95711 162 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 PGA3P0DJD8 388 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CTLA4P16410 223 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 S100A4P26447 101 aaKnown RBP7.7□□□□□ -1.18
PTCD3-201ENST00000254630 OR3A1P47881 315 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 SELENOPP49908 381 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CTF1Q16619 201 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF721Q8TF20 911 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 RAB40CQ96S21 281 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 RASL11BQ9BPW5 248 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 TTTY12Q9BZ98 90 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 MEX3AA1L020 520 aaKnown RBP7.7□□□□□ -1.18
PTCD3-201ENST00000254630 BGLAPP02818 100 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 SLC37A1P57057 533 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 HIKESHIQ53FT3 197 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CBLN3Q6UW01 205 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 TMEM210A6NLX4 147 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 HRKO00198 91 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 SNCGO76070 127 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 IGHA2P01877 340 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 FAM3AP98173 230 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 PJVKQ0ZLH3 352 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 HLXQ14774 488 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-201ENST00000254630 ETFDHQ16134 617 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms