RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SHBQ15464 509 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 LIAT1Q6ZQX7 453 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC25A42Q86VD7 318 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 OTOSQ8NHW6 89 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 ARRDC3Q96B67 414 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 C4orf45Q96LM5 186 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 TMEM147Q9BVK8 224 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 TLNRD1Q9H1K6 362 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 TMPRSS11DO60235 418 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 HOXA6P31267 233 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 ARG2P78540 354 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 JMJD6Q6NYC1 403 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 TMEM116Q8NCL8 245 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 BHLHE23Q8NDY6 225 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 WBP2Q969T9 261 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 MS4A6EQ96DS6 147 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 ASB16Q96NS5 453 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 NUDT16L1Q9BRJ7 211 aaKnown RBP11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZNF576Q9H609 170 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
PCDHGA3-201ENST00000253812 PRSS38A1L453 326 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 IER3P46695 156 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 SHHQ15465 462 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 CLEC18BQ6UXF7 455 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 BATF2Q8N1L9 274 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 WIPI2Q9Y4P8 454 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 RREB1Q92766 1687 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 NPIPB9F8W1W9 429 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 MT-ND6P03923 174 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 SMIM17P0DL12 118 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 RPL34P49207 117 aaKnown RBP11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC25A26Q70HW3 274 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 UTP23Q9BRU9 249 aaKnown RBP11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 DAPP1Q9UN19 280 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR51B4Q9Y5P0 310 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 GRPP07492 148 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 MELTFP08582 738 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 THBS4P35443 961 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 MEOX1P50221 254 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 ARHGAP5-AS1Q96IT6 56 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 PPP1R3EQ9H7J1 279 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 BSGP35613 385 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 FOLR3P41439 243 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 PABPC1L2AQ5JQF8 200 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 LYSMD4Q5XG99 296 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 OBP2AQ9NY56 170 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZFP30Q9Y2G7 519 aa11.76□□□□□ -0.53
PCDHGA3-201ENST00000253812 LRRC3CA6NJW4 275 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 PDE6DO43924 150 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 SOD3P08294 240 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 TCL1AP56279 114 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 CLDN15P56746 228 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 FDX2Q6P4F2 183 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 C17orf47Q8NEP4 570 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 MRPS24Q96EL2 167 aaKnown RBP11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 GMPPAQ96IJ6 420 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 PIPOXQ9P0Z9 390 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 NUP205Q92621 2012 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR2T8A6NH00 312 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 HAND1O96004 215 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 RPS4Y1P22090 263 aaKnown RBP11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC25A1P53007 311 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 HERVK_113P61574 105 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 AGERQ15109 404 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 PLPPR5Q32ZL2 321 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC35E3Q7Z769 313 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 SPSB1Q96BD6 273 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 MUCL1Q96DR8 90 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 TIMM10BQ9Y5J6 103 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 CFDP00746 253 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 FGF2P09038 288 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 PNLIPRP2P54317 469 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 GAMTQ14353 236 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 MSRB3Q8IXL7 192 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 DYNLRB1Q9NP97 96 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 UPK1AO00322 258 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 HFEQ30201 348 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 WDR38Q5JTN6 314 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 WDFY1Q8IWB7 410 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 CNEP1R1Q8N9A8 125 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 MRPL30Q8TCC3 161 aaKnown RBP11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZMIZ1Q9ULJ6 1067 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 SIGLEC7Q9Y286 467 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 TRIOBPQ9H2D6 2365 aa11.75□□□□□ -0.53
PCDHGA3-201ENST00000253812 A0A1B0GTL3 188 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR5B21A6NL26 309 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 DNPH1O43598 174 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 CRYABP02511 175 aaKnown RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC25A5P05141 298 aaKnown RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 STAG3L3P0CL85 134 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 DYNLT3P51808 116 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 MRPL54Q6P161 138 aaKnown RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC25A34Q6PIV7 304 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms