RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 TRIB1Q96RU8 372 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 DPCDQ9BVM2 203 aaPredicted RBP19.69■□□□□ 0.74
HOXD9-201ENST00000249499 DECR2Q9NUI1 292 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 S100A11P31949 105 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 EIF2S3P41091 472 aaKnown RBP19.69■□□□□ 0.74
HOXD9-201ENST00000249499 WNT5AP41221 380 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 NPY4RP50391 375 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 ARPC4P59998 168 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 MRPL49Q13405 166 aaKnown RBP19.69■□□□□ 0.74
HOXD9-201ENST00000249499 HLXQ14774 488 aaPredicted RBP19.69■□□□□ 0.74
HOXD9-201ENST00000249499 PIGYQ3MUY2 71 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 Q6ZT83 130 aa19.69■□□□□ 0.74
HOXD9-201ENST00000249499 FRYQ5TBA9 3013 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 SFT2D2O95562 160 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 FCGR3AP08637 254 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 FUT3P21217 361 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 OR2A2Q6IF42 318 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 MKXQ8IYA7 352 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 TMEM230Q96A57 120 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 CYYR1Q96J86 154 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 SULT4A1Q9BR01 284 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 UBQLN2Q9UHD9 624 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 MAB21L2Q9Y586 359 aa19.68■□□□□ 0.74
HOXD9-201ENST00000249499 OR5B21A6NL26 309 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 ANKRD30BLA7E2S9 258 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 SLC25A4P12235 298 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 ZNF169Q14929 603 aaPredicted RBP19.67■□□□□ 0.74
HOXD9-201ENST00000249499 TMEM211Q6ICI0 200 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 OR6K3Q8NGY3 331 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 RTBDNQ9BSG5 229 aaPredicted RBP19.67■□□□□ 0.74
HOXD9-201ENST00000249499 PDCD10Q9BUL8 212 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 COMMD9Q9P000 198 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 FXYD6-FXYD2A0A087WZ82 144 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 ANKRD34BA5PLL1 514 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 OR5H14A6NHG9 310 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 TUBAL3A6NHL2 446 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 AHRRA9YTQ3 701 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 ARPC5O15511 151 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 ZNF14P17017 642 aaPredicted RBP19.67■□□□□ 0.74
HOXD9-201ENST00000249499 IGHV1-2P23083 117 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 UBE2NP61088 152 aaKnown RBP19.67■□□□□ 0.74
HOXD9-201ENST00000249499 FGF12P61328 243 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 SORDQ00796 357 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 INO80CQ6PI98 192 aaPredicted RBP19.67■□□□□ 0.74
HOXD9-201ENST00000249499 C1orf162Q8NEQ5 155 aaPredicted RBP19.67■□□□□ 0.74
HOXD9-201ENST00000249499 FXYD6Q9H0Q3 95 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 NECAP2Q9NVZ3 263 aa19.67■□□□□ 0.74
HOXD9-201ENST00000249499 TRAV14DV4A0A0A6YYC5 116 aa19.66■□□□□ 0.74
HOXD9-201ENST00000249499 SDCBPO00560 298 aaPredicted RBP19.66■□□□□ 0.74
HOXD9-201ENST00000249499 CYCSP99999 105 aaKnown RBP19.66■□□□□ 0.74
HOXD9-201ENST00000249499 EXOSC2Q13868 293 aaKnown RBP19.66■□□□□ 0.74
HOXD9-201ENST00000249499 COQ8AQ8NI60 647 aa19.66■□□□□ 0.74
HOXD9-201ENST00000249499 MAFIPQ8WZ33 124 aa19.66■□□□□ 0.74
HOXD9-201ENST00000249499 OR5P3Q8WZ94 311 aa19.66■□□□□ 0.74
HOXD9-201ENST00000249499 HDHD3Q9BSH5 251 aaPredicted RBP19.66■□□□□ 0.74
HOXD9-201ENST00000249499 FGF23Q9GZV9 251 aaPredicted RBP19.66■□□□□ 0.74
HOXD9-201ENST00000249499 IGKV1D-8A0A087WSZ0 117 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 ZNF732B4DXR9 585 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 ERVH48-1M5A8F1 160 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 HAAOP46952 286 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 GPM6AP51674 278 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 SRSF7Q16629 238 aaKnown RBP eCLIP19.65■□□□□ 0.74
HOXD9-201ENST00000249499 MPV17LQ2QL34 196 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 FBXW12Q6X9E4 464 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 TMUB2Q71RG4 321 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 LINC00596Q86U02 117 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 CASTOR1Q8WTX7 329 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 CEP295Q9C0D2 2601 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 PLK3Q9H4B4 646 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 C12orf4Q9NQ89 552 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 C14orf166Q9Y224 244 aaKnown RBP19.65■□□□□ 0.74
HOXD9-201ENST00000249499 MSTNO14793 375 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 GABRA6Q16445 453 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 C6orf183Q5T699 404 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 ZNF660Q6AZW8 331 aaPredicted RBP19.65■□□□□ 0.74
HOXD9-201ENST00000249499 DHRS11Q6UWP2 260 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 RFPL4BQ6ZWI9 263 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 ZNF573Q86YE8 665 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 RHOFQ9HBH0 211 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 ZNF286AQ9HBT8 521 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 RAB18Q9NP72 206 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 LHX6Q9UPM6 363 aa19.65■□□□□ 0.74
HOXD9-201ENST00000249499 CELSR3Q9NYQ7 3312 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 NOS1APO75052 506 aaPredicted RBP19.64■□□□□ 0.73
HOXD9-201ENST00000249499 COX5AP20674 150 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 GNG3P63215 75 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 CLLU1Q5K131 121 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 C11orf87Q6NUJ2 197 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 CLEC18BQ6UXF7 455 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 C3P1Q6ZMU1 363 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 OR8H3Q8N146 312 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 PKIBQ9C010 78 aa19.64■□□□□ 0.73
HOXD9-201ENST00000249499 A0A0D9SG52 128 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 MED19A0JLT2 244 aaPredicted RBP19.63■□□□□ 0.73
HOXD9-201ENST00000249499 LINC00862A6NCI5 91 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 RP2O75695 350 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 CTSDP07339 412 aaPredicted RBP19.63■□□□□ 0.73
HOXD9-201ENST00000249499 OR5H8P0DN80 308 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 KIR2DL2P43627 348 aaPredicted RBP19.63■□□□□ 0.73
HOXD9-201ENST00000249499 NPBWR2P48146 333 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms