RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 IGKV1-27A0A075B6S5 117 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 BORCS7-ASMTA0A0B4J1R7 106 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 GEMIN2O14893 280 aaKnown RBP17.5■□□□□ 0.39
CACTIN-202ENST00000248420 DUX1O43812 170 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 ONECUT2O95948 504 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 PATE4P0C8F1 98 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 RPS10P46783 165 aaKnown RBP17.5■□□□□ 0.39
CACTIN-202ENST00000248420 CSNK1A1P48729 337 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 RSU1Q15404 277 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 ZNF343Q6P1L6 599 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 HPSE2Q8WWQ2 592 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 TM2D1Q9BX74 207 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 SLC35B3Q9H1N7 401 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 PHF1O43189 567 aaPredicted RBP17.5■□□□□ 0.39
CACTIN-202ENST00000248420 SEC11BP0C7V7 166 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 CD27P26842 260 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 LTBRP36941 435 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 P2RY1P47900 373 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 HNRNPKP61978 463 aaKnown RBP eCLIP17.5■□□□□ 0.392e-7■■■■□ 24.5
CACTIN-202ENST00000248420 SLC22A25Q6T423 547 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 SLC22A8Q8TCC7 542 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 OR51M1Q9H341 326 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 SLC2A9Q9NRM0 540 aa17.5■□□□□ 0.39
CACTIN-202ENST00000248420 COL5A1P20908 1838 aaPredicted RBP17.5■□□□□ 0.39
CACTIN-202ENST00000248420 FAM24AA6NFZ4 105 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 M0R135 149 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 ZNHIT1O43257 154 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 SUMO3P55854 103 aaPredicted RBP17.49■□□□□ 0.39
CACTIN-202ENST00000248420 RPS23P62266 143 aaKnown RBP17.49■□□□□ 0.39
CACTIN-202ENST00000248420 ENDOGQ14249 297 aaKnown RBP17.49■□□□□ 0.39
CACTIN-202ENST00000248420 HMGN3Q15651 99 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 HIST3H3Q16695 136 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 SLC16A14Q7RTX9 510 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 WDSUB1Q8N9V3 476 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 ZNF799Q96GE5 643 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 NDUFS6O75380 124 aaKnown RBP17.49■□□□□ 0.39
CACTIN-202ENST00000248420 OR2C1O95371 312 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 C9orf152Q5JTZ5 239 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 TAAR9Q96RI9 348 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 GINS3Q9BRX5 216 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 MAGT1Q9H0U3 335 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 MYOTQ9UBF9 498 aa17.49■□□□□ 0.39
CACTIN-202ENST00000248420 NSG1A0A0A6YYJ2 146 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 AP4M1O00189 453 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 GPR137BO60478 399 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 MSR1P21757 451 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 EIF2S3P41091 472 aaKnown RBP17.48■□□□□ 0.39
CACTIN-202ENST00000248420 HAGHQ16775 308 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 NKAIN1Q4KMZ8 207 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 OR2M3Q8NG83 312 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 OR1J1Q8NGS3 322 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 ARV1Q9H2C2 271 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 PISDQ9UG56 409 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 EXPH5Q8NEV8 1989 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 CELA2AP08217 269 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 SOHLH1Q5JUK2 328 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 GJC3Q8NFK1 279 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 TCTEX1D2Q8WW35 142 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 V9GYS6 101 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 WDFY4Q6ZS81 3184 aa17.48■□□□□ 0.39
CACTIN-202ENST00000248420 ALDH3B1P43353 468 aa17.47■□□□□ 0.39
CACTIN-202ENST00000248420 TP53RKQ96S44 253 aa17.47■□□□□ 0.39
CACTIN-202ENST00000248420 NECAP2Q9NVZ3 263 aa17.47■□□□□ 0.39
CACTIN-202ENST00000248420 IGHV2-70P01814 119 aa17.47■□□□□ 0.39
CACTIN-202ENST00000248420 SLC35G3Q8N808 338 aa17.47■□□□□ 0.39
CACTIN-202ENST00000248420 OR6C1Q96RD1 312 aa17.47■□□□□ 0.39
CACTIN-202ENST00000248420 AQP7P3A6NL99 342 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 PPIHO43447 177 aaKnown RBP17.46■□□□□ 0.39
CACTIN-202ENST00000248420 PIAS2O75928 621 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 IGLV3-1P01715 115 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 PDZD11Q5EBL8 140 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 SUMF2Q8NBJ7 301 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 PP6455Q8WZ26 134 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 MR1Q95460 341 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 NELFAQ9H3P2 528 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 RRP8O43159 456 aaKnown RBP17.46■□□□□ 0.39
CACTIN-202ENST00000248420 ST8SIA3O43173 380 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 KIAA0141Q14154 515 aaPredicted RBP17.46■□□□□ 0.39
CACTIN-202ENST00000248420 LIAT1Q6ZQX7 453 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 SLC25A45Q8N413 288 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 OR10AD1Q8NGE0 317 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 MSI2Q96DH6 328 aaKnown RBP17.46■□□□□ 0.39
CACTIN-202ENST00000248420 GGACTQ9BVM4 153 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 TUBA4BQ9H853 241 aa17.46■□□□□ 0.39
CACTIN-202ENST00000248420 H0YL77 283 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 GDF9O60383 454 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 NDUFA6P56556 154 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 NSUN5P2Q63ZY6 315 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 LURAP1LQ8IV03 231 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 TMEM217Q8N7C4 229 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 OR2G3Q8NGZ4 309 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 METTL9Q9H1A3 318 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 WNT16Q9UBV4 365 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 IGKV1-12A0A0C4DH73 117 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 TLX3O43711 291 aaPredicted RBP17.45■□□□□ 0.38
CACTIN-202ENST00000248420 IGKV1D-12P01611 117 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 S100PP25815 95 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 UCP2P55851 309 aa17.45■□□□□ 0.38
CACTIN-202ENST00000248420 KCNMB1Q16558 191 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms