RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ALKBH6Q3KRA9 238 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 ZNF782Q6ZMW2 699 aaPredicted RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 TLNRD1Q9H1K6 362 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 C20orf85Q9H1P6 137 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 IFT22Q9H7X7 185 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 SPACA1Q9HBV2 294 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 EDARQ9UNE0 448 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 C7orf66A4D0T2 115 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 DISC1C4P0D8 188 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 SYNGR1O43759 233 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 NOS1APO75052 506 aaPredicted RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 GLAP06280 429 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 DTYMKP23919 212 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 SELENOVP59797 346 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 RNASE10Q5GAN6 216 aaKnown RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 SFRP4Q6FHJ7 346 aaPredicted RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 HOGA1Q86XE5 327 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 OR10AD1Q8NGE0 317 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 EMG1Q92979 244 aaKnown RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 RNASE6Q93091 150 aaKnown RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 PRRT1Q99946 306 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 SLC25A21Q9BQT8 299 aaPredicted RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 NPDC1Q9NQX5 325 aaPredicted RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 RCC2Q9P258 522 aaKnown RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 A0A0B4J293 547 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 A0A1B0GUH1 482 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 HMX3A6NHT5 357 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 ATP6V1G2-DDX39BF2Z307 99 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 PEX14O75381 377 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 PTBP3O95758 552 aaKnown RBP12.08□□□□□ -0.48
SDF2-201ENST00000247020 THBDP07204 575 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 CD200P41217 278 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 MRPS15P82914 257 aaKnown RBP12.08□□□□□ -0.48
SDF2-201ENST00000247020 SORDQ00796 357 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 ZNF154Q13106 437 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 PIGYQ3MUY2 71 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 VAX1Q5SQQ9 334 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 C22orf34Q6ZV56 151 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 C6orf201Q7Z4U5 140 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 WDR86Q86TI4 376 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 FAM58AQ8N1B3 248 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 LILRB4Q8NHJ6 448 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 FBXW5Q969U6 566 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 POLEQ07864 2286 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 MAP1BP46821 2468 aaKnown RBP12.08□□□□□ -0.48
SDF2-201ENST00000247020 CHD8Q9HCK8 2581 aa12.08□□□□□ -0.48
SDF2-201ENST00000247020 PRR14LQ5THK1 2151 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 TRAV6A0A075B6T7 132 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 ZNF735P0CB33 412 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 PGA5P0DJD9 388 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 TAS2R46P59540 309 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 ERVK11-1P61568 191 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 FAAP20Q6NZ36 180 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 Q6ZR03 302 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 WFDC8Q8IUA0 241 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 BPIFB2Q8N4F0 458 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 ARRDC1Q8N5I2 433 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 GVQW1Q8N7I0 195 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 OR4D10Q8NGI6 311 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 ALG5Q9Y673 324 aa12.07□□□□□ -0.48
SDF2-201ENST00000247020 RP1L1Q8IWN7 2480 aaPredicted RBP12.06□□□□□ -0.48
SDF2-201ENST00000247020 POM121CA8CG34 1229 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 H0YL77 283 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 OR7C1O76099 320 aaPredicted RBP12.06□□□□□ -0.48
SDF2-201ENST00000247020 AMY2AP04746 511 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 PRKACAP17612 351 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 ADORA2A-AS1P86434 159 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 SRSF7Q16629 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
SDF2-201ENST00000247020 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 FIP1L1Q6UN15 594 aaKnown RBP12.06□□□□□ -0.48
SDF2-201ENST00000247020 AKAP14Q86UN6 197 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 BEST4Q8NFU0 473 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 OR51S1Q8NGJ8 323 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 OR4K15Q8NH41 348 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
SDF2-201ENST00000247020 SNAPC3Q92966 411 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 MRPL24Q96A35 216 aaKnown RBP12.06□□□□□ -0.48
SDF2-201ENST00000247020 MED30Q96HR3 178 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 RADILQ96JH8 1075 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 CMSS1Q9BQ75 279 aaKnown RBP12.06□□□□□ -0.48
SDF2-201ENST00000247020 NRIP2Q9BQI9 281 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 SULT4A1Q9BR01 284 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 GINS4Q9BRT9 223 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 ESRP2Q9H6T0 727 aaKnown RBP12.06□□□□□ -0.48
SDF2-201ENST00000247020 NDRG3Q9UGV2 375 aa12.06□□□□□ -0.48
SDF2-201ENST00000247020 PLSCR5A0PG75 271 aa12.05□□□□□ -0.48
SDF2-201ENST00000247020 DPRXA6NFQ7 191 aa12.05□□□□□ -0.48
SDF2-201ENST00000247020 IL5P05113 134 aa12.05□□□□□ -0.48
SDF2-201ENST00000247020 HRH1P35367 487 aa12.05□□□□□ -0.48
SDF2-201ENST00000247020 DAZAP2Q15038 168 aaPredicted RBP12.05□□□□□ -0.48
SDF2-201ENST00000247020 SPIN3Q5JUX0 258 aa12.05□□□□□ -0.48
SDF2-201ENST00000247020 RTN4RL2Q86UN3 420 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms