RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 HGDQ93099 445 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 BLACEA4D250 179 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 NKX2-6A6NCS4 301 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 RAB5AP20339 215 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 ZBP1Q9H171 429 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 S1PR5Q9H228 398 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 TOGARAM1Q9Y4F4 1720 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A6P0DMU7 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A5P0DMU8 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A7P0DMV0 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A8P0DMV1 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A9P0DMV2 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 ABCD3P28288 659 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A2Q5DJT8 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A1Q5HYN5 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 GTF2H5Q6ZYL4 71 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CT45A3Q8NHU0 189 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 NOL4LQ96MY1 436 aaPredicted RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 PLEKHA2Q9HB19 425 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 SCGB1C2P0DMR2 95 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 GABRA1P14867 456 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 TFF2Q03403 129 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 RPEL1Q2QD12 228 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 ZDHHC23Q8IYP9 409 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 OR2A1Q8NGT9 310 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 SH3BGRL3Q9H299 93 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 TMEM189-UBE2V1I3L0A0 370 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 RAB1AP62820 205 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 TBC1D28Q2M2D7 210 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 KDF1Q8NAX2 398 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 COX7A2P2O60397 106 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 DUSP3P51452 185 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 KIAA0040Q15053 153 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 ATRAIDQ6UW56 229 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 OR10P1Q8NGE3 313 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 TGIF2-C20orf24A0A0A6YYL0 155 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 A0A1W2PP11 408 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 A0A1W2PPE3 182 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 MAP1LC3B2A6NCE7 125 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 RAB35Q15286 201 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 Q3ZCU0 254 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 LDLRAD3Q86YD5 345 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 OR2I1PQ8NGU4 316 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 MAP1LC3BQ9GZQ8 125 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 CST9Q5W186 159 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 LPCAT3Q6P1A2 487 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 ARHGEF39Q8N4T4 335 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 DUSP22Q9NRW4 184 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 MTFP1Q9UDX5 166 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 IGKV3-7A0A075B6H7 116 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CHST1O43916 411 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CTSVO60911 334 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CST4P01036 141 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 RBP4P02753 201 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CEACAM6P40199 344 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 IER3P46695 156 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 TIGITQ495A1 244 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CBLN3Q6UW01 205 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 SMIM15Q7Z3B0 74 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CDC20BQ86Y33 519 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 LINC01465Q8N7H1 131 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 OR1L3Q8NH93 324 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 PRPH2P23942 346 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 SPICQ8N5J4 248 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 SLC35E1Q96K37 410 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 FRRS1LQ9P0K9 344 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 GOLT1BQ9Y3E0 138 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 M0R2Z0 102 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 RGS7BPQ6MZT1 257 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 CACNG5Q9UF02 275 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 ATP23Q9Y6H3 246 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CEACAM5P06731 702 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 COL13A1Q5TAT6 717 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 ZNF573Q86YE8 665 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 MISP3Q96FF7 219 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 TBX19O60806 448 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 ITGBL1O95965 494 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 WDR74Q6RFH5 385 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 HDAC8Q9BY41 377 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 A0A1B0GTQ1 180 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 HSBP1O75506 76 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 CST2P09228 141 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 KLF9Q13886 244 aaPredicted RBP6.69□□□□□ -1.34
RIF1-201ENST00000243326 CDCP2Q5VXM1 449 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 TMEM215Q68D42 235 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 IL21Q9HBE4 155 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 B3GAT1Q9P2W7 334 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 M0R1X1 148 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 Q56UQ5 140 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 KCND3Q9UK17 655 aa6.69□□□□□ -1.34
RIF1-201ENST00000243326 LFNGQ8NES3 379 aa6.68□□□□□ -1.34
RIF1-201ENST00000243326 C4orf45Q96LM5 186 aa6.68□□□□□ -1.34
RIF1-201ENST00000243326 ZNF488Q96MN9 340 aa6.68□□□□□ -1.34
RIF1-201ENST00000243326 LPAR3Q9UBY5 353 aa6.68□□□□□ -1.34
RIF1-201ENST00000243326 SSMEM1Q8WWF3 244 aa6.68□□□□□ -1.34
RIF1-201ENST00000243326 GNRHR2Q96P88 292 aa6.68□□□□□ -1.34
RIF1-201ENST00000243326 THAP10Q9P2Z0 257 aaPredicted RBP6.68□□□□□ -1.34
RIF1-201ENST00000243326 ICAM5Q9UMF0 924 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms