RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ZNF442Q9H7R0 627 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 MRPS18CQ9Y3D5 142 aaKnown RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 JMJD1CQ15652 2540 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 CELSR1Q9NYQ6 3014 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 EXPH5Q8NEV8 1989 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 PRAF2O60831 178 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 SRSF10O75494 262 aaKnown RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 SCGB1D2O95969 90 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 IGFBP3P17936 291 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 CAPZA1P52907 286 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 S100A10P60903 97 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 PPP1R1AQ13522 171 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 STK11Q15831 433 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 RAB12Q6IQ22 244 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 C5orf24Q7Z6I8 188 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 C14orf79Q96F83 325 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 GON7Q9BXV9 100 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 MFFQ9GZY8 342 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 LIME1Q9H400 295 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 OR2S2Q9NQN1 319 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 RDH8Q9NYR8 311 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 FOXD3Q9UJU5 478 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 HIVEP1P15822 2718 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 TEX13DA0A0J9YY54 714 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 SCO1O75880 301 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 ISG15P05161 165 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 H3F3AP84243 136 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF92Q03936 586 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 DHRS2Q13268 280 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 EXOSC2Q13868 293 aaKnown RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 PLAC9Q5JTB6 97 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 ATPAF1Q5TC12 328 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 PGAP1Q75T13 922 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF546Q86UE3 836 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 NARS2Q96I59 477 aaKnown RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 LPAR5Q9H1C0 372 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 HEATR1Q9H583 2144 aaKnown RBP7.46□□□□□ -1.21
VPS4B-201ENST00000238497 OR2AT4A6NND4 320 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 A8MXE2 369 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 MSTNO14793 375 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 RAD51DO75771 328 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 DHRS3O75911 302 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 IL18BPO95998 194 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 NRASP01111 189 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF17P17021 662 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 GLRA1P23415 457 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 HGFACQ04756 655 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 SCRN3Q0VDG4 424 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 PIGYQ3MUY2 71 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 HIKESHIQ53FT3 197 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 FAM74A1Q5RGS3 127 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 UNQ6126/PRO20091Q6UXV3 157 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 SLC25A26Q70HW3 274 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 OR14K1Q8NGZ2 314 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 OR6S1Q8NH40 331 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 FAM222BQ8WU58 562 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 STARD4Q96DR4 205 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 CMTM3Q96MX0 182 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF471Q9BX82 626 aaPredicted RBP7.46□□□□□ -1.21
VPS4B-201ENST00000238497 PNRC2Q9NPJ4 139 aaKnown RBP7.46□□□□□ -1.21
VPS4B-201ENST00000238497 VSIG4Q9Y279 399 aa7.46□□□□□ -1.21
VPS4B-201ENST00000238497 MED13LQ71F56 2210 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 ARHGAP21Q5T5U3 1957 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 IGLV3-32A0A0A0MS00 114 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 ADAP1O75689 374 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 NGFP01138 241 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 IGFBP2P18065 325 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 KIR2DL2P43627 348 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-201ENST00000238497 TMEM50BP56557 158 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 RAB1AP62820 205 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 RIPPLY1Q0D2K3 151 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 MICBQ29980 383 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF260Q3ZCT1 412 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF626Q68DY1 528 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 GGNQ86UU5 652 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 WFDC8Q8IUA0 241 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 TMEM123Q8N131 208 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 FBXL14Q8N1E6 418 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 OR51F2Q8NH61 342 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 RNF138Q8WVD3 245 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 GPR35Q9HC97 309 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF175Q9Y473 711 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 TIMM10BQ9Y5J6 103 aa7.46□□□□□ -1.22
VPS4B-201ENST00000238497 A0A0A6YYD4 124 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 A6NNC1 897 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 C16orf97H3BN30 126 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 TNFSF13O75888 250 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 BPNT1O95861 308 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF239Q16600 458 aaKnown RBP7.45□□□□□ -1.22
VPS4B-201ENST00000238497 RSPO1Q2MKA7 263 aaPredicted RBP7.45□□□□□ -1.22
VPS4B-201ENST00000238497 SP6Q3SY56 376 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 TEX261Q6UWH6 196 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 MRPL21Q7Z2W9 205 aaKnown RBP7.45□□□□□ -1.22
VPS4B-201ENST00000238497 OR56B1Q8NGI3 324 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 APH1AQ96BI3 265 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 PIK3IP1Q96FE7 263 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 GPHA2Q96T91 129 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 PIGMQ9H3S5 423 aa7.45□□□□□ -1.22
VPS4B-201ENST00000238497 TMEM38BQ9NVV0 291 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms