RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CHRNB4P30926 498 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ASCL1P50553 236 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ZNF154Q13106 437 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 TMEM108Q6UXF1 575 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ZNF782Q6ZMW2 699 aaPredicted RBP12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ZNF554Q86TJ5 538 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 LRP11Q86VZ4 500 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 OR51S1Q8NGJ8 323 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 TMEM171Q8WVE6 324 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 SNAPC3Q92966 411 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 FAAP24Q9BTP7 215 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 ALG5Q9Y673 324 aa12.95□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A10PA6NDY2 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A18PA6NE21 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A16PA6NEW6 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 DPRXA6NFQ7 191 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A20PA6NIJ5 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A8PA6NJQ4 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A7PA6NKC0 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 TMEM210A6NLX4 147 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A22PA8MWA6 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A12PA8MX19 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A5PA8MXJ8 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A23PA8MXZ1 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 IGHV3-13P01766 116 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A15PP0C7V4 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A13PP0C7W8 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A14PP0C7W9 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A24PP0C7X0 464 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 PPP3CBP16298 524 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 PTAFRP25105 342 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 CBX5P45973 191 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 ADORA2A-AS1P86434 159 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 CD300CQ08708 224 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 PDCD1Q15116 288 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FBXL19-AS1Q494R0 122 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 EMG1Q92979 244 aaKnown RBP12.94□□□□□ -0.34
HDHD3-201ENST00000238379 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 MSL2Q9HCI7 577 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 NPDC1Q9NQX5 325 aaPredicted RBP12.94□□□□□ -0.34
HDHD3-201ENST00000238379 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 DUSP13Q9UII6 198 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 FLVCR2Q9UPI3 526 aa12.94□□□□□ -0.34
HDHD3-201ENST00000238379 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
HDHD3-201ENST00000238379 PRSS44E7EML9 344 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 PDCD6O75340 191 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 DHFRP00374 187 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 FUT3P21217 361 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 MAB21L1Q13394 359 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 HOGA1Q86XE5 327 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 OR13G1Q8NGZ3 307 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 SULT4A1Q9BR01 284 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 RHOFQ9HBH0 211 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 IL36RNQ9UBH0 155 aa12.93□□□□□ -0.34
HDHD3-201ENST00000238379 IGLV3-9A0A075B6K5 115 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 F5H5P2 479 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 CDIPTO14735 213 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 ATXN7O15265 892 aaPredicted RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 OR7C1O76099 320 aaPredicted RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 AMY2AP04746 511 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 GRPP07492 148 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 TBPP20226 339 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 ERVK11-1P61568 191 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 MEF2DQ14814 521 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 RBMS2Q15434 407 aaKnown RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 RNASE10Q5GAN6 216 aaKnown RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 BRICD5Q6PL45 260 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 VHLLQ6RSH7 139 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 SPERTQ8NA61 448 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 NUP37Q8NFH4 326 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 SLC6A7Q99884 636 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 HDHD3Q9BSH5 251 aaPredicted RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 PLK3Q9H4B4 646 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 AK3Q9UIJ7 227 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 POLDIP2Q9Y2S7 368 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 KALRNO60229 2985 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 IGHV3-64DA0A0J9YX35 117 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 PEX14O75381 377 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 PRKACAP17612 351 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 HRH1P35367 487 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 SNU13P55769 128 aaKnown RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 KLF3P57682 345 aaPredicted RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 RPS23P62266 143 aaKnown RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 MPV17LQ2QL34 196 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 C11orf53Q8IXP5 236 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 FAM58AQ8N1B3 248 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 BPIFB2Q8N4F0 458 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 OR4K15Q8NH41 348 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 LILRB4Q8NHJ6 448 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 NRIP2Q9BQI9 281 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 ST6GALNAC5Q9BVH7 336 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 TLNRD1Q9H1K6 362 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 GHITMQ9H3K2 345 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 COQ3Q9NZJ6 369 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 ZNF230Q9UIE0 474 aaPredicted RBP12.92□□□□□ -0.34
HDHD3-201ENST00000238379 PLEKHA6Q9Y2H5 1048 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms