RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TBCEQ15813 527 aaPredicted RBP9.39□□□□□ -0.91
SF3B6-201ENST00000233468 FAM120AOSQ5T036 256 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 STUMQ69YW2 141 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 ACP7Q6ZNF0 438 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 SLC25A26Q70HW3 274 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF367Q7RTV3 350 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 CALHM1Q8IU99 346 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 ZFP41Q8N8Y5 198 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 PNLDC1Q8NA58 520 aaKnown RBP9.39□□□□□ -0.91
SF3B6-201ENST00000233468 ANGPTL6Q8NI99 470 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 RAB40AQ8WXH6 277 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 DMRTB1Q96MA1 342 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 S100A13Q99584 98 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 CCL13Q99616 98 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 WDR13Q9H1Z4 485 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 C7orf69Q9H7B7 122 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 SNTG1Q9NSN8 517 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 FOXJ3Q9UPW0 622 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 MEGF11A6BM72 1044 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.38□□□□□ -0.91
SF3B6-201ENST00000233468 DVL1O14640 695 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 SIGLEC5O15389 551 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 GPX5O75715 221 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 PLATP00750 562 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 CHRM2P08172 466 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 TMEM225BP0DP42 221 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 PSG2P11465 335 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 SRD5A1P18405 259 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
SF3B6-201ENST00000233468 BDKRB2P30411 391 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 RANBP1P43487 201 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 HNRNPA0Q13151 305 aaKnown RBP9.38□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF529Q6P280 563 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF841Q6ZN19 808 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF788Q6ZQV5 615 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 SATL1Q86VE3 508 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 CDH26Q8IXH8 852 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF561Q8N587 486 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 OR5T2Q8NGG2 359 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 TBC1D15Q8TC07 691 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 ST8SIA4Q92187 359 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 RGP1Q92546 391 aaPredicted RBP9.38□□□□□ -0.91
SF3B6-201ENST00000233468 PHYHIPQ92561 330 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 FCGR1BQ92637 280 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 EMG1Q92979 244 aaKnown RBP9.38□□□□□ -0.91
SF3B6-201ENST00000233468 SLAMF9Q96A28 289 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 SDSLQ96GA7 329 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 OR5M11Q96RB7 305 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 SLITRK2Q9H156 845 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 HES4Q9HCC6 221 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 SMURF1Q9HCE7 757 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 TAS2R4Q9NYW5 299 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 LSM2Q9Y333 95 aaKnown RBP9.38□□□□□ -0.91
SF3B6-201ENST00000233468 LRRC42Q9Y546 428 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 INSIG2Q9Y5U4 225 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 AUP1Q9Y679 476 aa9.38□□□□□ -0.91
SF3B6-201ENST00000233468 IGKV1-27A0A075B6S5 117 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 IGHV2-70DA0A0C4DH43 119 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 KIR2DS1A0A191URI9 304 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 A0A1W2PPH5 198 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 RFPL4AA6NLU0 287 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 RFPL4AL1F8VTS6 287 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF780AO75290 641 aaPredicted RBP9.37□□□□□ -0.91
SF3B6-201ENST00000233468 PPIAL4GP0DN37 164 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 FSTP19883 344 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 PRDX2P32119 198 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF93P35789 620 aaPredicted RBP9.37□□□□□ -0.91
SF3B6-201ENST00000233468 TGFBR2P37173 567 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 RBMXP38159 391 aaKnown RBP9.37□□□□□ -0.91
SF3B6-201ENST00000233468 CAPZA1P52907 286 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 ERVK11-1P61568 191 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 SEC61A1P61619 476 aaKnown RBP9.37□□□□□ -0.91
SF3B6-201ENST00000233468 IKZF1Q13422 519 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 TPBGQ13641 420 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 DOC2BQ14184 412 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 ACSM3Q53FZ2 586 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 SPIN3Q5JUX0 258 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 FAM58AQ8N1B3 248 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 NKAIN3Q8N8D7 197 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 PXT1Q8NFP0 134 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 PPP1R35Q8TAP8 253 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 NANPQ8TBE9 248 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 OR14A2Q96R54 314 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 MGLLQ99685 303 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 NUDT16L1Q9BRJ7 211 aaKnown RBP9.37□□□□□ -0.91
SF3B6-201ENST00000233468 TMED9Q9BVK6 235 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 SEBOXQ9HB31 216 aaPredicted RBP9.37□□□□□ -0.91
SF3B6-201ENST00000233468 TCF7L1Q9HCS4 588 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 MTCH1Q9NZJ7 389 aa9.37□□□□□ -0.91
SF3B6-201ENST00000233468 SLC25A10Q9UBX3 287 aaPredicted RBP9.37□□□□□ -0.91
SF3B6-201ENST00000233468 TENM1Q9UKZ4 2725 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 IGKV1D-17A0A075B6S4 117 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 TRBV5-7A0A0A0MS05 114 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 TRBV23-1A0A0A0MS06 115 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 SPRY1O43609 319 aaPredicted RBP9.36□□□□□ -0.91
SF3B6-201ENST00000233468 ARL6IP5O75915 188 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 KDM4BO94953 1096 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 CPEP16870 476 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms