RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 VSIG8P0DPA2 414 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 RAB38P57729 211 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 RPS4XP62701 263 aaKnown RBP11.41□□□□□ -0.58
MSH2-201ENST00000233146 FOXK1P85037 733 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 DPPA3Q6W0C5 159 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 TUBG2Q9NRH3 451 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 ZNF732B4DXR9 585 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 ACRP10323 421 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 CLDN18P56856 261 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 PAFAH1B2P68402 229 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 EWSR1Q01844 656 aaKnown RBP eCLIP11.41□□□□□ -0.58
MSH2-201ENST00000233146 SLC8B1Q6J4K2 584 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 ABHD3Q8WU67 409 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 CTHRC1Q96CG8 243 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 ABHD6Q9BV23 337 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 GNG13Q9P2W3 67 aa11.41□□□□□ -0.58
MSH2-201ENST00000233146 C14orf166Q9Y224 244 aaKnown RBP11.41□□□□□ -0.58
MSH2-201ENST00000233146 VSTM2BA6NLU5 285 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 BNIP3LO60238 219 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 HIST1H1TP22492 207 aaPredicted RBP11.4□□□□□ -0.58
MSH2-201ENST00000233146 TNFSF4P23510 183 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 HSD11B1P28845 292 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 ARR3P36575 388 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 DNASE1L1P49184 302 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 SNRPD1P62314 119 aaKnown RBP11.4□□□□□ -0.58
MSH2-201ENST00000233146 MEP1BQ16820 701 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 TMEM95Q3KNT9 176 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 DCST2Q5T1A1 773 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 ZNF780BQ9Y6R6 833 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 H7BYZ3 331 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 SDCBPO00560 298 aaPredicted RBP11.4□□□□□ -0.58
MSH2-201ENST00000233146 BPNT1O95861 308 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 BCL2P10415 239 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 GCH1P30793 250 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 FLT3LGP49771 235 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 NHLH1Q02575 133 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 CLEC12BQ2HXU8 276 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 OR5L1Q8NGL2 311 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 OR2T10Q8NGZ9 312 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 OTOSQ8NHW6 89 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 CMTM2Q8TAZ6 248 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 LPAR5Q9H1C0 372 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 MKKSQ9NPJ1 570 aaPredicted RBP11.4□□□□□ -0.58
MSH2-201ENST00000233146 NAT8Q9UHE5 227 aa11.4□□□□□ -0.58
MSH2-201ENST00000233146 MYADML2A6NDP7 307 aa11.4□□□□□ -0.59
MSH2-201ENST00000233146 VWA1Q6PCB0 445 aa11.4□□□□□ -0.59
MSH2-201ENST00000233146 ZNF709Q8N972 641 aa11.4□□□□□ -0.59
MSH2-201ENST00000233146 BCL2L2Q92843 193 aaPredicted RBP11.4□□□□□ -0.59
MSH2-201ENST00000233146 P2RX4Q99571 388 aa11.4□□□□□ -0.59
MSH2-201ENST00000233146 LRIT1Q9P2V4 623 aa11.4□□□□□ -0.59
MSH2-201ENST00000233146 PRSS50Q9UI38 385 aa11.4□□□□□ -0.59
MSH2-201ENST00000233146 TBX21Q9UL17 535 aa11.4□□□□□ -0.59
MSH2-201ENST00000233146 SCN2AQ99250 2005 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 HYPMO75409 117 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 JMJD7P0C870 316 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 IGLC3P0DOY3 106 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 HNRNPA3P51991 378 aaKnown RBP11.39□□□□□ -0.59
MSH2-201ENST00000233146 MTCP1P56278 107 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 TPPP2P59282 170 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 RPL15P61313 204 aaKnown RBP11.39□□□□□ -0.59
MSH2-201ENST00000233146 ADIRFQ15847 76 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 CTXN3Q4LDR2 81 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 NICN1Q9BSH3 213 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 K7ERU9 68 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 SFTPDP35247 375 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 BIDP55957 195 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 EXOSC7Q15024 291 aaKnown RBP11.39□□□□□ -0.59
MSH2-201ENST00000233146 TRMT12Q53H54 448 aaKnown RBP11.39□□□□□ -0.59
MSH2-201ENST00000233146 PLAC9Q5JTB6 97 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 FCRL6Q6DN72 434 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 Q6ZN92 141 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 DYRK2Q92630 601 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 BET1LQ9NYM9 111 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 FBLN5Q9UBX5 448 aa11.39□□□□□ -0.59
MSH2-201ENST00000233146 A0A0A6YYD4 124 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 ZNF840PA6NDX5 716 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 CRYM-AS1A6NIL9 109 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 GPR89AB7ZAQ6 455 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 PRRT4C9JH25 899 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 PITX3O75364 302 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 PIAS2O75928 621 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 STATHP02808 62 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 GPR89BP0CG08 455 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 AMY2BP19961 511 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 VIPR2P41587 438 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 BLKP51451 505 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 Q5PR19 223 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 NPAS4Q8IUM7 802 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 OR5D18Q8NGL1 313 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 AGMATQ9BSE5 352 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 MANBALQ9NQG1 85 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 B9D1Q9UPM9 204 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 ERGP11308 486 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 FAHP16930 419 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 PSEN2P49810 448 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 BSXQ3C1V8 233 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 CYP2G1PQ6ZSU1 146 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 APOBEC3FQ8IUX4 373 aaKnown RBP11.38□□□□□ -0.59
MSH2-201ENST00000233146 OR5AR1Q8NGP9 310 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms