RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 BCL7BQ9BQE9 202 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 NEURL2Q9BR09 285 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 PKIBQ9C010 78 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 SIRPDQ9H106 197 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 ELL3Q9HB65 397 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 ERGIC3Q9Y282 383 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 EXOSC1Q9Y3B2 195 aaKnown RBP11.33□□□□□ -0.6
VEGFA-201ENST00000230480 TRBV2A0A0J9YWF9 115 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 EFCAB10A6NFE3 127 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 RFPL4AA6NLU0 287 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 TMEM212A6NML5 194 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 RFPL4AL1F8VTS6 287 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 PIN1P1O15428 100 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 ALX3O95076 343 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 PLATP00750 562 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 CDK1P06493 297 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 SFTPBP07988 381 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 AZGP1P25311 298 aaKnown RBP11.32□□□□□ -0.6
VEGFA-201ENST00000230480 GBX2P52951 348 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-201ENST00000230480 DLX1P56177 255 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 ZP1P60852 638 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 SLC35A2P78381 396 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 KRTAP24-1Q3LI83 254 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 CCDC58Q4VC31 144 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 RNLSQ5VYX0 342 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF573Q86YE8 665 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 Q8N7P7 452 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF676Q8N7Q3 588 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 OR5AK2Q8NH90 309 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 C8orf46Q8TAG6 207 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF671Q8TAW3 534 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 PP6455Q8WZ26 134 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 C1orf147Q96MC9 270 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-201ENST00000230480 OR5M11Q96RB7 305 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 NKX3-1Q99801 234 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-201ENST00000230480 DNTTIP1Q9H147 329 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 RPUSD1Q9UJJ7 312 aaKnown RBP11.32□□□□□ -0.6
VEGFA-201ENST00000230480 AUP1Q9Y679 476 aa11.32□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF737O75373 536 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 PPIAL4GP0DN37 164 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 NPY4RP50391 375 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 FGF12P61328 243 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF846Q147U1 533 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 SLC25A26Q70HW3 274 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 RAB2BQ8WUD1 216 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 GHSRQ92847 366 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 SLAMF9Q96A28 289 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 DCTN5Q9BTE1 182 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 CDCA4Q9BXL8 241 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 WDR12Q9GZL7 423 aaKnown RBP11.31□□□□□ -0.6
VEGFA-201ENST00000230480 ZCCHC4Q9H5U6 513 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 TRIM36Q9NQ86 728 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 RASL12Q9NYN1 266 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 OR5V1Q9UGF6 321 aa11.31□□□□□ -0.6
VEGFA-201ENST00000230480 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 TMEM82A0PJX8 343 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 IRGMA1A4Y4 181 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 SPRY1O43609 319 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-201ENST00000230480 ANGPTL7O43827 346 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 CCDC159P0C7I6 412 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 CALCBP10092 127 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 IGFBP3P17936 291 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-201ENST00000230480 BCL3P20749 454 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 EPHA1P21709 976 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 PCMT1P22061 227 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 PRDX2P32119 198 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 SOX2P48431 317 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 PRB3Q04118 309 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-201ENST00000230480 PDZK1IP1Q13113 114 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 IKZF1Q13422 519 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 INSL4Q14641 139 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 KCNJ8Q15842 424 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 HCP5Q6MZN7 132 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 OR52N4Q8NGI2 321 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 OR13F1Q8NGS4 319 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 OR13C3Q8NGS6 347 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 S100ZQ8WXG8 99 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 C22orf15Q8WYQ4 148 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 RFT1Q96AA3 541 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 OPALINQ96PE5 141 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 RBFOX1Q9NWB1 397 aaKnown RBP11.3□□□□□ -0.6
VEGFA-201ENST00000230480 TAS2R4Q9NYW5 299 aa11.3□□□□□ -0.6
VEGFA-201ENST00000230480 ANK2Q01484 3957 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 TRAV8-7A0A075B6U6 113 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF879B4DU55 563 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 PTGES3LE9PB15 166 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 GATBO75879 557 aaKnown RBP11.29□□□□□ -0.6
VEGFA-201ENST00000230480 CLPXO76031 633 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 INMTO95050 263 aa11.29□□□□□ -0.6
VEGFA-201ENST00000230480 HNF1AP20823 631 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms