RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 IDO2Q6ZQW0 420 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 FBXW5Q969U6 566 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 MARS2Q96GW9 593 aaKnown RBP12.74□□□□□ -0.37
CCDC47-201ENST00000225726 PRRT1Q99946 306 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 TINAGQ9UJW2 476 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 ST3GAL6Q9Y274 331 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 A0A0G2JNJ9 132 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 FAM172BPA6NC97 362 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 A8MXE2 369 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 HRH1P35367 487 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 HOGA1Q86XE5 327 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 EMG1Q92979 244 aaKnown RBP12.74□□□□□ -0.37
CCDC47-201ENST00000225726 MICU1Q9BPX6 476 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 RTL8AQ9BWD3 113 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 ING3Q9NXR8 418 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 Q9UFV3 132 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 SPENQ96T58 3664 aaKnown RBP12.73□□□□□ -0.37
CCDC47-201ENST00000225726 CEP295Q9C0D2 2601 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A10PA6NDY2 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A18PA6NE21 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A16PA6NEW6 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A20PA6NIJ5 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A8PA6NJQ4 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A7PA6NKC0 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A22PA8MWA6 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A12PA8MX19 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A5PA8MXJ8 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A23PA8MXZ1 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 GEMIN2O14893 280 aaKnown RBP12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A15PP0C7V4 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A13PP0C7W8 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A14PP0C7W9 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FAM90A24PP0C7X0 464 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 BCL3P20749 454 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 MRGPRGQ86SM5 289 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 TCTE3Q8IZS6 198 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 OR4K15Q8NH41 348 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 KLF14Q8TD94 323 aaPredicted RBP12.73□□□□□ -0.37
CCDC47-201ENST00000225726 CYYR1Q96J86 154 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 PKIBQ9C010 78 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 ANXA7P20073 488 aaKnown RBP12.73□□□□□ -0.37
CCDC47-201ENST00000225726 NPBWR2P48146 333 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 PSG7Q13046 419 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 FCN2Q15485 313 aa12.73□□□□□ -0.37
CCDC47-201ENST00000225726 GPN1Q9HCN4 374 aaPredicted RBP12.73□□□□□ -0.37
CCDC47-201ENST00000225726 PRSS44E7EML9 344 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 TRAPPC2LH3BP13 241 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 BMP5P22003 454 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 CALCRP30988 508 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 MPV17P39210 176 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 NHLRC3Q5JS37 347 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 BEST4Q8NFU0 473 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 PTPRQQ9UMZ3 2332 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 C1QTNF9BB2RNN3 333 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 EEF1E1-BLOC1S5C9J1V9 151 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 C1QTNF9P0C862 333 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 FGF12P61328 243 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 IL24Q13007 206 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 NKPD1Q17RQ9 610 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 SLC36A1Q7Z2H8 476 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 OR10AD1Q8NGE0 317 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 MUCL1Q96DR8 90 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 OR51I2Q9H344 312 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 B8ZZF3 427 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 PDCD6O75340 191 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 PMP2P02689 132 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 HPXP02790 462 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 RLN1P04808 185 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 CSN2P05814 226 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 AMY2BP19961 511 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 KLRB1Q12918 225 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 MICBQ29980 383 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 SCGB2B2Q4G0G5 96 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 ADAT1Q9BUB4 502 aaKnown RBP12.72□□□□□ -0.37
CCDC47-201ENST00000225726 MTCH1Q9NZJ7 389 aa12.72□□□□□ -0.37
CCDC47-201ENST00000225726 SNRPGP15A8MWD9 76 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 SSNA1O43805 119 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 IFNA6P05013 189 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 PMELP40967 661 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 NAAAQ02083 359 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 HAGHLQ6PII5 290 aaPredicted RBP12.71□□□□□ -0.37
CCDC47-201ENST00000225726 OR8H1Q8NGG4 311 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 SEC22CQ9BRL7 303 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 ZNF581Q9P0T4 197 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 AK3Q9UIJ7 227 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 PURGQ9UJV8 347 aaKnown RBP12.71□□□□□ -0.37
CCDC47-201ENST00000225726 J3QT63 122 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 SYNGR1O43759 233 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 VSIG10L2P0DP72 767 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 KITLGP21583 273 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 ZNF83P51522 516 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 MAB21L1Q13394 359 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 ALKBH6Q3KRA9 238 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 MBNL2Q5VZF2 373 aaKnown RBP12.71□□□□□ -0.37
CCDC47-201ENST00000225726 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 OR13C8Q8NGS7 320 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 FAAP24Q9BTP7 215 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms