RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 AQP8O94778 261 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 INPP5JQ15735 1006 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM251Q8N6I4 163 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 ATAD5Q96QE3 1844 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 SCGB1D1O95968 90 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 COX5AP20674 150 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 CEACAM3P40198 252 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 MARC2Q969Z3 335 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 ADAM19Q9H013 955 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 CST2P09228 141 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 SLC25A4P12235 298 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 PXDC1Q5TGL8 231 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 NECAP1Q8NC96 275 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 PYCARD-AS1I3L0S3 204 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 F2RL2O00254 374 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 ZNF331Q9NQX6 463 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-201ENST00000223398 OR5V1Q9UGF6 321 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 IGKV1D-16P01601 117 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 COX6B1P14854 86 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 HMGA2P52926 109 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM267Q0VDI3 215 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-201ENST00000223398 SCARB1Q8WTV0 552 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 DDA1Q9BW61 102 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM231Q9H6L2 316 aa16.28■□□□□ 0.2
CLIP2-201ENST00000223398 AMMECR1Q9Y4X0 333 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-201ENST00000223398 FFAR1O14842 300 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 BCL3P20749 454 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 HMGN3Q15651 99 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 NHLRC1Q6VVB1 395 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 TIPARPQ7Z3E1 657 aaKnown RBP16.27■□□□□ 0.2
CLIP2-201ENST00000223398 A0A0J9YW62 118 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 A0A1W2PQM1 296 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 C21orf58P58505 322 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 ZNF787Q6DD87 383 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 PPP1R1CQ8WVI7 109 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 IL17BQ9UHF5 180 aa16.27■□□□□ 0.2
CLIP2-201ENST00000223398 LNP1A1A4G5 178 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 TAAR5O14804 337 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 MT-ND4LP03901 98 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 OR4A8P0C604 315 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 MDH2P40926 338 aaKnown RBP16.27■□□□□ 0.19
CLIP2-201ENST00000223398 RAB7AP51149 207 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 RPS4XP62701 263 aaKnown RBP16.27■□□□□ 0.19
CLIP2-201ENST00000223398 OR2F1Q13607 317 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 CYSLTR2Q9NS75 346 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 RNF7Q9UBF6 113 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 PNPP00491 289 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 IGHA2P01877 340 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 TMEM128Q5BJH2 165 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 RPL7L1Q6DKI1 246 aaKnown RBP16.27■□□□□ 0.19
CLIP2-201ENST00000223398 CADM3Q8N126 398 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 LSMEM1Q8N8F7 131 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 SLC25A32Q9H2D1 315 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 TMEM38BQ9NVV0 291 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 OR6C3Q9NZP0 311 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 CCL27Q9Y4X3 112 aa16.27■□□□□ 0.19
CLIP2-201ENST00000223398 KRBOX1C9JBD0 128 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 LSM11P83369 360 aaKnown RBP eCLIP16.26■□□□□ 0.19
CLIP2-201ENST00000223398 TNXAQ16473 311 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 ADAM5Q6NVV9 412 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 DPF1Q92782 380 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 PLEKHA2Q9HB19 425 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 V9GYS6 101 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 BGLAPP02818 100 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 CTSBP07858 339 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 SPNS3Q6ZMD2 512 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 OR5B3Q8NH48 314 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 LSM6P62312 80 aaKnown RBP16.26■□□□□ 0.19
CLIP2-201ENST00000223398 TSPO2Q5TGU0 170 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 ARRDC1Q8N5I2 433 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 DNASE2BQ8WZ79 361 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 MS4A5Q9H3V2 200 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 CLEC5AQ9NY25 188 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 MMP15P51511 669 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 C10orf111Q8N326 155 aa16.26■□□□□ 0.19
CLIP2-201ENST00000223398 ZNF764Q96H86 408 aaPredicted RBP16.26■□□□□ 0.19
CLIP2-201ENST00000223398 CYTIPO60759 359 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 HAND1O96004 215 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 RRASP10301 218 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 IL11P20809 199 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 CCL8P80075 99 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 SLC23A3Q6PIS1 610 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 CD300LDQ6UXZ3 194 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 RELL2Q8NC24 303 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-201ENST00000223398 MITD1Q8WV92 249 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 CES1P1Q9UKY3 287 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 DOCK3Q8IZD9 2030 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 KCNJ3P48549 501 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 TIGITQ495A1 244 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 AKR1E2Q96JD6 320 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 TRAV39A0A0B4J263 110 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 UPK3AO75631 287 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 RSPO4Q2I0M5 234 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-201ENST00000223398 WDR89Q96FK6 387 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-201ENST00000223398 FGF5P12034 268 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 TRAT1Q6PIZ9 186 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 GVQW1Q8N7I0 195 aa16.25■□□□□ 0.19
CLIP2-201ENST00000223398 MRPL22Q9NWU5 206 aaKnown RBP16.25■□□□□ 0.19
CLIP2-201ENST00000223398 SEC16AO15027 2179 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 A0A1B0GUH1 482 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms