RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 GINS3Q9BRX5 216 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 RGCCQ9H4X1 137 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 ESRP2Q9H6T0 727 aaKnown RBP11.56□□□□□ -0.56
SRP54-201ENST00000216774 UBE2ZQ9H832 354 aaPredicted RBP11.56□□□□□ -0.56
SRP54-201ENST00000216774 BCO1Q9HAY6 547 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 SLC2A9Q9NRM0 540 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 LUZP4Q9P127 313 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 DUSP1P28562 367 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 SNCAP37840 140 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 P2RY1P47900 373 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 CXCL12P48061 93 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 RAB5CP51148 216 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 RAC3P60763 192 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 IL13RA2Q14627 380 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 RSPO4Q2I0M5 234 aaPredicted RBP11.56□□□□□ -0.56
SRP54-201ENST00000216774 TDHQ8IZJ6 230 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 LGI3Q8N145 548 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 OR10AD1Q8NGE0 317 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 AKR1E2Q96JD6 320 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 JSRP1Q96MG2 331 aaPredicted RBP11.56□□□□□ -0.56
SRP54-201ENST00000216774 C12orf57Q99622 126 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 SYT3Q9BQG1 590 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 SRXN1Q9BYN0 137 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 TMEM38BQ9NVV0 291 aa11.56□□□□□ -0.56
SRP54-201ENST00000216774 NRASP01111 189 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 LCATP04180 440 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 ID4P47928 161 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 CTAG1AP78358 180 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 HGFACQ04756 655 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 OR8B8Q15620 311 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 SP6Q3SY56 376 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 ZNF774Q6NX45 483 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 OSR2Q8N2R0 312 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 CPT1CQ8TCG5 803 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 CLDN23Q96B33 292 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 MOB3AQ96BX8 217 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 LHX6Q9UPM6 363 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 GEMIN2O14893 280 aaKnown RBP11.55□□□□□ -0.56
SRP54-201ENST00000216774 KLK3P07288 261 aaPredicted RBP11.55□□□□□ -0.56
SRP54-201ENST00000216774 PMELP40967 661 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 RAB5BP61020 215 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 MIDNQ504T8 468 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 LYSMD4Q5XG99 296 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 SLC22A25Q6T423 547 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 LYZL2Q7Z4W2 148 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 TMEM156Q8N614 296 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 SECTM1Q8WVN6 248 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 MSI2Q96DH6 328 aaKnown RBP11.55□□□□□ -0.56
SRP54-201ENST00000216774 POM121Q96HA1 1249 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 TECTBQ96PL2 329 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 CRLF2Q9HC73 371 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 ZNF581Q9P0T4 197 aa11.55□□□□□ -0.56
SRP54-201ENST00000216774 PTRH2Q9Y3E5 179 aaKnown RBP11.55□□□□□ -0.56
SRP54-201ENST00000216774 STRAPQ9Y3F4 350 aaKnown RBP11.55□□□□□ -0.56
SRP54-201ENST00000216774 G3V3Y1 287 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 KLF7O75840 302 aaPredicted RBP11.54□□□□□ -0.56
SRP54-201ENST00000216774 KCNJ3P48549 501 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 FUT6P51993 359 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 PIGYQ3MUY2 71 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 FBXL14Q8N1E6 418 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 CCDC71LQ8N9Z2 235 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 SFT2D1Q8WV19 159 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 MARS2Q96GW9 593 aaKnown RBP11.54□□□□□ -0.56
SRP54-201ENST00000216774 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
SRP54-201ENST00000216774 FBXO9Q9UK97 447 aaPredicted RBP11.54□□□□□ -0.56
SRP54-201ENST00000216774 TMED3Q9Y3Q3 217 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 HS3ST3B1Q9Y662 390 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 MED12Q93074 2177 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 EML6Q6ZMW3 1958 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 MYO7BQ6PIF6 2116 aa11.54□□□□□ -0.56
SRP54-201ENST00000216774 CCDC187A0A096LP49 1063 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 IGKV1-12A0A0C4DH73 117 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 C9J4A7 227 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 PDCD6O75340 191 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 IGKV1D-12P01611 117 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 TCN2P20062 427 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 GLP1RP43220 463 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 PPT1P50897 306 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 MLF1P58340 268 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 FXYD4P59646 89 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 RNF212Q495C1 297 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 PHLDA2Q53GA4 152 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 RPS19BP1Q86WX3 136 aaKnown RBP11.53□□□□□ -0.56
SRP54-201ENST00000216774 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 SCRT1Q9BWW7 348 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 TUBA4BQ9H853 241 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 WFDC1Q9HC57 220 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 SLC7A11Q9UPY5 501 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 ST3GAL6Q9Y274 331 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 CACNA1EQ15878 2313 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 MASP2O00187 686 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 DIRAS3O95661 229 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 GLAP06280 429 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
SRP54-201ENST00000216774 ZNF32P17041 273 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 PTAFRP25105 342 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 HTR5AP47898 357 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms