RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SLC25A46Q96AG3 418 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 OR8B4Q96RC9 309 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 LIN7CQ9NUP9 197 aaKnown RBP12.09□□□□□ -0.47
SIX4-201ENST00000216513 SLC25A10Q9UBX3 287 aaPredicted RBP12.09□□□□□ -0.47
SIX4-201ENST00000216513 LSM11P83369 360 aaKnown RBP eCLIP12.09□□□□□ -0.47
SIX4-201ENST00000216513 TLE4Q04727 773 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 LCN15Q6UWW0 184 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 ACY3Q96HD9 319 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 TIMP4Q99727 224 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 HILPDAQ9Y5L2 63 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 OR6C68A6NDL8 312 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 NHLRC1Q6VVB1 395 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 OTOFQ9HC10 1997 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 ECSCRQ19T08 205 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 ATG4DQ86TL0 474 aaPredicted RBP12.09□□□□□ -0.47
SIX4-201ENST00000216513 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
SIX4-201ENST00000216513 C12orf10Q9HB07 376 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 NEUROG3Q9Y4Z2 214 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 K7EQM0 130 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 PTGFRP43088 359 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 CMPK2Q5EBM0 449 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 C17orf47Q8NEP4 570 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 OR6C3Q9NZP0 311 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 SULT1C2O00338 296 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 NUP37Q8NFH4 326 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 OR2M2Q96R28 347 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 SLC7A10Q9NS82 523 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 ELOVL5Q9NYP7 299 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 MPC1Q9Y5U8 109 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 POMT1Q9Y6A1 747 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 FCGR3BO75015 233 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 ONECUT2O95948 504 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 ZBTB25P24278 435 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 UBE2G2P60604 165 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 TNXAQ16473 311 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 DCAF12L2Q5VW00 463 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 OR1S2Q8NGQ3 325 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 SPSB1Q96BD6 273 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 FCRL1Q96LA6 429 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 TMUB2Q71RG4 321 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 KLHDC8BQ8IXV7 354 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 J3QKU1 62 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 PF4P02776 101 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 TNFSF10P50591 281 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 RPS27AP62979 156 aaKnown RBP12.08□□□□□ -0.48
SIX4-201ENST00000216513 UBA52P62987 128 aaKnown RBP12.08□□□□□ -0.48
SIX4-201ENST00000216513 Q3ZCU0 254 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 LGI3Q8N145 548 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 UHRF2Q96PU4 802 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 NTN4Q9HB63 628 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 RBFOX1Q9NWB1 397 aaKnown RBP12.08□□□□□ -0.48
SIX4-201ENST00000216513 IL11P20809 199 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 OR2T6Q8NHC8 308 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 FLVCR1Q9Y5Y0 555 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 CACNA1EQ15878 2313 aa12.08□□□□□ -0.48
SIX4-201ENST00000216513 ZAR1LA6NP61 321 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 RAF1P04049 648 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 FAM26EQ8N5C1 309 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 SLC25A19Q9HC21 320 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 CACNA1CQ13936 2221 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 OR5B21A6NL26 309 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 SEMA7AO75326 666 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 TGFAP01135 160 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 FUT3P21217 361 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 UCP2P55851 309 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 CEBPEQ15744 281 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 FAM168AQ92567 244 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 GPR137Q96N19 417 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 CCL13Q99616 98 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 IGKV1D-16P01601 117 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 OR3A1P47881 315 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 KISS1Q15726 138 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 ACSF3Q4G176 576 aaPredicted RBP12.07□□□□□ -0.48
SIX4-201ENST00000216513 ZNF788Q6ZQV5 615 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 PHYHIPQ92561 330 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 ARV1Q9H2C2 271 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
SIX4-201ENST00000216513 PNPP00491 289 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 PF4V1P10720 104 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 HLA-DOBP13765 273 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 CALCRP30988 508 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 CDKN1AP38936 164 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 KCNIP4Q6PIL6 250 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 C1RLQ9NZP8 487 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 SNAPINO95295 136 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 TOR2AQ5JU69 321 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 STAC2Q6ZMT1 411 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 GPR32P1Q8NGA4 272 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 OR2G3Q8NGZ4 309 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 IL36GQ9NZH8 169 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 GAB2Q9UQC2 676 aa12.07□□□□□ -0.48
SIX4-201ENST00000216513 TRDV1A0A1B0GX56 115 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 HAND1O96004 215 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 SLC25A30Q5SVS4 291 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms