RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 AADACL3Q5VUY0 350 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SEMA6DQ8NFY4 1073 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 IER2Q9BTL4 223 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 FAAP24Q9BTP7 215 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 PECRQ9BY49 303 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 CHST5Q9GZS9 411 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 MCTS1Q9ULC4 181 aaKnown RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 GJE1A6NN92 205 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 ZNF716A6NP11 495 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 CYC1P08574 325 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 MRPS34P82930 218 aaKnown RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 PSG4Q00888 419 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 PEA15Q15121 130 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 DHRS7BQ6IAN0 325 aaPredicted RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 SLC16A14Q7RTX9 510 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 LURAP1LQ8IV03 231 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SSC4DQ8WTU2 575 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SECTM1Q8WVN6 248 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 PSMF1Q92530 271 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 TOMM40LQ969M1 308 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SULT4A1Q9BR01 284 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 BIN3Q9NQY0 253 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 TMEM100Q9NV29 134 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 PCDHGA1Q9Y5H4 931 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 IGKV1-27A0A075B6S5 117 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 A0A1W2PNU3 283 aaPredicted RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 MEX3AA1L020 520 aaKnown RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 C9orf172C9J069 976 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SCGNO76038 276 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 CSTBP04080 98 aaKnown RBP11.42□□□□□ -0.58
CTNS-201ENST00000046640 PRF1P14222 555 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 CTSSP25774 331 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 THBS4P35443 961 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 AVPI1Q5T686 147 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 OR1F12Q8NHA8 337 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 HAS2Q92819 552 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 ISOC2Q96AB3 205 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 C14orf79Q96F83 325 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 FOXB1Q99853 325 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 SLC5A7Q9GZV3 580 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 TMEM38BQ9NVV0 291 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 FBLN5Q9UBX5 448 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 V9GYS6 101 aa11.42□□□□□ -0.58
CTNS-201ENST00000046640 PCSK5Q92824 1860 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 A0A0U1RQV5 110 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 LINC00587B1AMM8 73 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 OR8U9P0C7N5 309 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 F2RL1P55085 397 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 POLR2GP62487 172 aaKnown RBP eCLIP11.41□□□□□ -0.58
CTNS-201ENST00000046640 C3AR1Q16581 482 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 SWI5Q1ZZU3 235 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 Q6ZRG5 221 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 SKA3Q8IX90 412 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 OR8U1Q8NH10 309 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 OR2V1Q8NHB1 315 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 GLYATL2Q8WU03 294 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 C2orf50Q96LR7 162 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 RAB18Q9NP72 206 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 RPS10P5Q9NQ39 176 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 RCC2Q9P258 522 aaKnown RBP11.41□□□□□ -0.58
CTNS-201ENST00000046640 DHRS7CA6NNS2 312 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 SYNGR3O43761 229 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 NME2P1O60361 137 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 SNRNP70P08621 437 aaKnown RBP11.41□□□□□ -0.58
CTNS-201ENST00000046640 ITGA3P26006 1051 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 OTX1P32242 354 aaPredicted RBP11.41□□□□□ -0.58
CTNS-201ENST00000046640 ASCL1P50553 236 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 FOXG1P55316 489 aaPredicted RBP11.41□□□□□ -0.58
CTNS-201ENST00000046640 SSPNQ14714 243 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 RSU1Q15404 277 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 SLC16A13Q7RTY0 426 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 BSCL2Q96G97 398 aaPredicted RBP11.41□□□□□ -0.58
CTNS-201ENST00000046640 CLCC1Q96S66 551 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 ZNF2Q9BSG1 426 aaPredicted RBP11.41□□□□□ -0.58
CTNS-201ENST00000046640 SEC11CQ9BY50 192 aa11.41□□□□□ -0.58
CTNS-201ENST00000046640 B4E171 279 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 IGLV3-1P01715 115 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 ACP1P24666 158 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 FPR2P25090 351 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 MPZP25189 248 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 PTGER4P35408 488 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 RBMXP38159 391 aaKnown RBP11.4□□□□□ -0.58
CTNS-201ENST00000046640 TSPAN7P41732 249 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 FHITP49789 147 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 GSK3AP49840 483 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 FXYD4P59646 89 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 ZNF616Q08AN1 781 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 TSPO2Q5TGU0 170 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 NANPQ8TBE9 248 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 PP6455Q8WZ26 134 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 PIGCQ92535 297 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 CALHM2Q9HA72 323 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 EDARQ9UNE0 448 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 CARHSP1Q9Y2V2 147 aaKnown RBP11.4□□□□□ -0.58
CTNS-201ENST00000046640 TRBV6-7A0A0A0MS04 114 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 PQLC2LA1A4F0 135 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 XRCC2O43543 280 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 HKR1P10072 659 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms