RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Amy2P00688 508 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Camk2bP28652 542 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Sec61a1P61620 476 aaKnown RBP13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm648Q3UJ22 213 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Olfr307Q8VFN8 313 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 CsprsQ99388 208 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Q9CWB7 115 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Eif1bQ9CXU9 113 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Arpc5lQ9D898 153 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Neu3Q9JMH7 418 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Espl1P60330 2118 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Obp1bA2AEP0 171 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Scgb1b30A2BH64 92 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm14743A2BHD2 171 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Esp16A8R0U9 85 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Rhox3gB9EJQ9 160 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm10112D3YWP5 117 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Tmem44E9Q4M0 433 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Olfr568E9Q554 313 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Msl3l2G3X992 371 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Zfp616J3QN14 987 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 P01680 129 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Dusp1P28563 367 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Lsm6P62313 80 aaKnown RBP13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Shisa6Q3UH99 525 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Wdr34Q5U4F6 535 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Olfr506Q7TRU6 314 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Prss27Q8BJR6 328 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Cnppd1Q8K158 407 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Mfsd6lQ8R3N2 586 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Olfr56Q8VGD6 315 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Mrgpra6Q91ZC6 301 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Ddb2Q99J79 432 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Tstd3Q9D0B5 157 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Rtl8bQ9D1F0 113 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Jag2Q9QYE5 1247 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Clcf1Q9QZM3 225 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Col27a1Q5QNQ9 1845 aa13.7□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm10358A0A1D5RLD8 333 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Vmn1r124D3YTX4 307 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 H2-T10F6T1I5 379 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm9772F6XPD8 135 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm16434J3QN10 205 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Igsf6P0C6B7 237 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Tcte3P11985 191 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 GapdhP16858 333 aaKnown RBP13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Pou2f1P25425 770 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Csnk2a1Q60737 391 aaKnown RBP13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Lcn4Q62472 185 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 9930022D16RikQ8BG27 128 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Tmprss7Q8BIK6 829 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Rdh9Q8K5C8 317 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Aimp2Q8R010 320 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 ApehQ8R146 732 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Sco2Q8VCL2 255 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Olfr815Q8VFU0 316 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Olfr539Q8VGL9 319 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Zfp61Q923D1 555 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Dnaja3Q99M87 480 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Dram2Q9CR48 267 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Nubp2Q9R061 275 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm3839S4R1W1 333 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Zfp688E9Q5M9 274 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Lipo5F6QKH6 233 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 3110082J24RikF6Z6Z2 108 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Vmn2r58K7N6V2 862 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Il7rP16872 459 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Zfp36P22893 319 aaKnown RBP13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 AhrP30561 848 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gpm6aP35802 278 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Fabp2P55050 132 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Rac1P63001 192 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Prr27Q3SYJ2 352 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Tmem104Q3TB48 496 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Dio1Q61153 257 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 LipkQ8BM14 398 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Fam120cQ8C3F2 1091 aaKnown RBP13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 NifkQ91VE6 317 aaKnown RBP13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Syt17Q920M7 470 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Atg5Q99J83 275 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 9230104L09RikQ9D264 133 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Phf7Q9DAG9 307 aa13.69□□□□□ -0.22
Vcan-201ENSMUST00000109543 Vmn2r76E9Q3F5 853 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Ascl4M0QW46 144 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Bpifa2P07743 235 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Cr2P19070 1025 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gsx2P31316 305 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Foxa3P35584 353 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Polr1dP97304 133 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Lgals3bpQ07797 577 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Gm826Q3UQ74 109 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Psg26Q4KL65 475 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 OmgQ63912 440 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Lmf2Q8C3X8 702 aaKnown RBP13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Elac1Q8VEB6 362 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Olfr1138Q8VFQ9 311 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 Tmem175Q9CXY1 499 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 MmachcQ9CZD0 279 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 9330161L09RikQ9D253 136 aa13.68□□□□□ -0.22
Vcan-201ENSMUST00000109543 9230110F15RikQ9D262 117 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 154.8 ms