RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Npffr1E9Q468 432 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Raet1aO08602 253 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Raet1bO08603 253 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 AipO08915 330 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 P01634 136 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Pld6Q5SWZ9 221 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Fbxw22Q5XG67 466 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr5Q60889 312 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr775Q7TRI4 312 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Kiaa0895lQ810A5 467 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tacstd2Q8BGV3 317 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ankrd34cQ8BLB8 534 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 GldnQ8BMF8 549 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Vmn1r19Q8R2C7 308 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Pla1aQ8VI78 456 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mob1aQ921Y0 216 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mcts2Q9CQ21 181 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 FcrlsQ9EQY5 509 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Riox1Q9JJF3 603 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr424E9Q0Q2 315 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr427E9Q7E7 315 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Rnf148G3X9R7 316 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 S1pr1O08530 382 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ca3P16015 260 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Cpeb1P70166 561 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Adra2cQ01337 458 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Vax1Q2NKI2 338 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gpr160Q3U3F9 336 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Scarb1Q61009 509 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Sox19Q62249 55 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Lcn4Q62472 185 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 March1Q6NZQ8 289 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Flrt1Q6RKD8 674 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr1357Q7TQU7 313 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Fam212bQ80VY2 300 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Lrfn4Q80XU8 636 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Actbl2Q8BFZ3 376 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Esco2Q8CIB9 592 aaKnown RBP11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mrpl48Q8JZS9 211 aaKnown RBP11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Il34Q8R1R4 235 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr992Q8VGC6 309 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Eef1akmt1Q9CY45 214 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ppp1r35Q9D8C8 260 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tcf23Q9JLR5 209 aa11.45□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ice1E9Q286 2241 aaKnown RBP11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Pi4kaE9Q3L2 2105 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Fam170bE9PXT9 378 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr432E9Q8M2 312 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm21761J3QK00 171 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 FgrP14234 517 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Irf1P15314 329 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Pax9P47242 342 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm525Q3V3I5 90 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm527Q4KL13 310 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 TrmoQ562D6 431 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr145Q60882 310 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Dact2Q7TN08 757 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Fam120cQ8C3F2 1091 aaKnown RBP11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ppp1r3bQ8C767 284 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tmem230Q8CIB6 120 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Rbm48Q8K2X2 371 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 PurgQ8R4E6 350 aaKnown RBP11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr995Q8VF74 315 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Pink1Q99MQ3 580 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tns1E9Q0S6 1888 aaKnown RBP11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ndufaf5A2APY7 343 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm14444A2ARW3 426 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr1158A2BHP7 313 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Rd3lB2RV38 197 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Nkx6-2D3Z4R4 277 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Slc18b1D3Z5L6 459 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm2035J3QP87 144 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 EhfO70273 300 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Csf1P07141 552 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Cd40lgP27548 260 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Dnase2P56542 353 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Cldn18P56857 264 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 HnrnpkP61979 463 aaKnown RBP11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 DhpsQ3TXU5 369 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Sult1c1Q80VR3 304 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gtdc1Q8BW56 445 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Naa40Q8VE10 237 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Elac1Q8VEB6 362 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr135Q8VEY4 312 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Steap4Q923B6 470 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tmem216Q9CQC4 141 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Vmn1r172Q9EPS4 313 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr930Q9EQ99 308 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 GltpQ9JL62 209 aa11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Actl6aQ9Z2N8 429 aaKnown RBP11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mki67E9PVX6 3177 aaKnown RBP11.44□□□□□ -0.58
Nup88-203ENSMUST00000108531 Igkv4-63A0A0G2JFU6 117 aa11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 E030025P04RikA2A6V5 185 aa11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr613E9PYB4 317 aa11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 Id1P20067 168 aa11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 MgmtP26187 211 aa11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 AdmP97297 184 aa11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 SlbpP97440 275 aaKnown RBP11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 Q3TTL0 348 aa11.43□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm826Q3UQ74 109 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms