RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 SgceO70258 437 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 H1f0P10922 194 aaKnown RBP8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Pcbp4P57724 403 aaKnown RBP8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr1168Q7TR25 312 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Sdhaf4Q8BTE0 104 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Spem2Q8C5U4 503 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 CenpoQ8K015 298 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Vmn1r230Q8R2A2 316 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr860Q8VFF7 317 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Nxph3Q91VX5 252 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Plekhf2Q91WB4 249 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Elp5Q99L85 300 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Rnf141Q99MB7 230 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Fbxo36Q9CQ24 188 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Dram2Q9CR48 267 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Mbd2Q9Z2E1 414 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Hbb-bh2B2RVB7 147 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Gm10037E9PX85 104 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Rdh16f1E9Q9P8 317 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Ccdc188F6WEU2 249 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Arg2O08691 354 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Cbfa2t3O54972 620 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Mmp9P41245 730 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Oprm1P42866 398 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Rab3cP62823 227 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Has2P70312 552 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Dhrs9Q58NB6 319 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 MybphlQ5FW53 355 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Epha5Q60629 876 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Ceacam14Q78Y72 263 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Mettl2Q8BMK1 389 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Slc16a13Q8CE94 428 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Lgi3Q8K406 548 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Il17rcQ8K4C2 698 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Vmn1r37Q8R2E4 302 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Swsap1Q8VCI7 278 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr434Q8VF17 321 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 ShpkQ9D5J6 476 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Alkbh7Q9D6Z0 221 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Mageh1Q9NWG9 218 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Spint2Q9WU03 252 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Ppt1O88531 306 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Kcnj15O88932 375 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Tacr3P47937 452 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 S1pr2P52592 352 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Adra2cQ01337 458 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Gm6760Q0ZNK3 87 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 A4gntQ14BT6 341 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Gm10644Q3TZG3 87 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr524Q7TRU0 318 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Fam98bQ80VD1 429 aaKnown RBP8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 WrbQ8K0D7 174 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr1424Q8VFV1 313 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Ddit4lQ8VHZ5 193 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Gje1Q9CX92 205 aa8.68□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Cfap54Q8C6S9 3106 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Jmjd1cQ69ZK6 2350 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Exph5Q0VAV2 1960 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Scml2B1AVB3 969 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Zfp160E9Q459 650 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr427E9Q7E7 315 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Yjefn3F6W8I0 251 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 MyogP12979 224 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Sdc1P18828 311 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Gramd2aQ3V3G7 320 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr5Q60889 312 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Glra1Q64018 457 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Usf2Q64705 346 aaKnown RBP8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 CslQ80X68 466 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Pcyt1bQ811Q9 369 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Ip6k3Q8BWD2 396 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr998Q8VF76 314 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr410Q8VFX7 315 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr402Q8VFX8 315 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Pofut1Q91ZW2 393 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 MynnQ99MD8 610 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 PecrQ99MZ7 303 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Atg12Q9CQY1 141 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Sgo1Q9CXH7 517 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Elp4Q9ER73 422 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 MyotQ9JIF9 496 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 IckQ9JKV2 629 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Adh4Q9QYY9 377 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Trav6-7-dv9A0A075B639 125 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Gprin2D3Z1D7 455 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Fam170bE9PXT9 378 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 GusbP12265 648 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Ccr1l1P51676 356 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Shc1P98083 579 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Bbs12Q5SUD9 708 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Kiaa0895lQ810A5 467 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Csnk1a1Q8BK63 337 aaKnown RBP8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Ube3dQ8BX13 368 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Tssk5Q8C1R0 372 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 4922502D21RikQ8C634 189 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Dctn4Q8CBY8 467 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Nectin4Q8R007 508 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr460Q8VF31 314 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Olfr497Q8VG08 314 aa8.67□□□□□ -1.02
Pcdh1-201ENSMUST00000057185 Sapcd1Q9CY86 146 aa8.67□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms