RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tmeff1Q6PFE7 372 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Aqp6Q8C4A0 293 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rhox3gB9EJQ9 160 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r211Q8R266 298 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r17Q8R2D8 303 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr980Q8VH08 310 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fkbp11Q9D1M7 201 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 MeltfQ9R0R1 738 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rpl7a-ps5A0A140T8L3 268 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 MgllO35678 303 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fam189a2Q4FZH1 290 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 MffQ6PCP5 291 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Thoc3Q8VE80 351 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Egln2Q91YE2 419 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Zfp623Q9CY99 499 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pard6aQ9Z101 346 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Sec14l3Q5SQ27 401 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 CybaQ61462 192 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tas2r39Q7TQA5 319 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Yipf6Q8BR70 236 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Dctn6Q9WUB4 190 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Bcl2l10Q9Z0F3 191 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Arap2Q8BZ05 1703 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r90A0A087WR36 309 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Defb43Q30KM9 69 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Q3U6N9 222 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm10696Q3UTC4 357 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Spin2cQ6NVE3 257 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Abhd17cQ8VCV1 320 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rhox2fA2ANE0 191 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r11Q3SXA2 299 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fndc4Q3TR08 231 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1509Q7TQQ0 308 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 LmlnQ8BMN4 681 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr206Q8VGP9 306 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Spns3Q9D232 514 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lypd6bQ9D7F2 191 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr943Q9EQ92 314 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm9047B9EJX3 177 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Abcd4O89016 606 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fbxw22Q5XG67 466 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Bst1Q64277 311 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 DmknQ6P253 517 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Upp2Q8CGR7 320 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mmp28Q8CGV8 520 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lin28aQ8K3Y3 209 aaKnown RBP10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cacng5Q8VHW4 275 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Abca7Q91V24 2159 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tmem182B2RVY9 229 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Hpse2B2RY83 592 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm8677K9J7G9 307 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Dpagt1P42867 410 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rpusd3Q14AI6 344 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rnf24Q8BGI1 148 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr935Q8VG16 308 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mcm3apQ9WUU9 1971 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rnf150Q5DTZ6 437 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olig3Q6PFG8 273 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 FevQ8QZW2 237 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Noxo1Q8VCM2 349 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr351Q8VGK1 310 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr378Q8VGT2 314 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc7a12Q8VIE6 465 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Man2c1Q91W89 1039 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc25a30Q9CR58 291 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm21778A0A087WNP8 232 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr199F6ZUS0 308 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Sod2P09671 222 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cd9P40240 226 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 ArsbP50429 534 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vma21Q78T54 101 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ceacam14Q78Y72 263 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr43Q7TRX1 313 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr403Q7TRX2 313 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 H2-M10.5Q85ZW7 330 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Znf628Q8CJ78 1038 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rfc3Q8R323 356 aaKnown RBP10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr38Q8VGP4 317 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr669Q8VGU9 317 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm43951A0A0N4SUT6 962 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc25a4P48962 298 aaKnown RBP10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Exosc2Q8VBV3 293 aaKnown RBP10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Plxdc2Q9DC11 530 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Nat8Q9JIY7 227 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ly6iQ9WU67 134 aa10.86□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr709-ps1A0A140T8J9 307 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1490A0A1L1SVH0 321 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Btbd8D3YUB6 377 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Oosp3G5E8D7 195 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Sult1a1P52840 291 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rab42Q0PD08 215 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr222Q7TS30 318 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Klre1Q8CJC7 226 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr448Q8VES9 310 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cryzl1Q921W4 348 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr721-ps1A0A140T8T9 324 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Nxpe5E0CX47 564 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Serf1O88892 62 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 P01631 113 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pet117P0DJF2 80 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms