RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ARL6IP1Q15041 203 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 RGS7BPQ6MZT1 257 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-229ENST00000641891 COLCA1Q6ZS62 124 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 RFPL4BQ6ZWI9 263 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 FAM219AQ8IW50 185 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 CCDC28AQ8IWP9 274 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 RELL2Q8NC24 303 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-229ENST00000641891 OR10AD1Q8NGE0 317 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 APH1AQ96BI3 265 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF2Q9BSG1 426 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-229ENST00000641891 REG4Q9BYZ8 158 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 BCO1Q9HAY6 547 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 SLC7A11Q9UPY5 501 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 KNTC1P50748 2209 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 hCG_1807616A0A1W2PRN6 198 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 KNG1P01042 644 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 CRHP06850 196 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 PGAM2P15259 253 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 CALCRP30988 508 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 ARPC4P59998 168 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 PPA1Q15181 289 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 OSR2Q8N2R0 312 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 OR56B2PQ8NGI1 322 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 ST8SIA2Q92186 375 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF75AQ96N20 296 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 LIME1Q9H400 295 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 RNFT1Q5M7Z0 435 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 RTL6Q6ICC9 239 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 TMPRSS7Q7RTY8 843 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 BHLHE23Q8NDY6 225 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 OR51F2Q8NH61 342 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 THAP6Q8TBB0 222 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 IP6K3Q96PC2 410 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 SCGB3A2Q96PL1 93 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 CMSS1Q9BQ75 279 aaKnown RBP14.66□□□□□ -0.06
PHGDH-229ENST00000641891 FGF23Q9GZV9 251 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-229ENST00000641891 C12orf49Q9H741 205 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 CHMP1AQ9HD42 196 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-229ENST00000641891 PRSS50Q9UI38 385 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 CSAG2Q9Y5P2 127 aa14.66□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF724A8MTY0 619 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 KLRC4-KLRK1H3BQV0 150 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 OR2F2O95006 317 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 FCGR3AP08637 254 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 PTGER4P35408 488 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 LUMP51884 338 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-229ENST00000641891 SRSF6Q13247 344 aaKnown RBP14.65□□□□□ -0.06
PHGDH-229ENST00000641891 OR2F1Q13607 317 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF345Q14585 488 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 FAM74A1Q5RGS3 127 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 RBPMSQ93062 196 aaKnown RBP14.65□□□□□ -0.06
PHGDH-229ENST00000641891 SDHAF2Q9NX18 166 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 ANXA10Q9UJ72 324 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 HSF4Q9ULV5 492 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 ST3GAL6Q9Y274 331 aa14.65□□□□□ -0.06
PHGDH-229ENST00000641891 TMA7Q9Y2S6 64 aaKnown RBP14.65□□□□□ -0.06
PHGDH-229ENST00000641891 KANTRA0A1W2PQU2 76 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 BCL2L11O43521 198 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 SCO1O75880 301 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 PSMB6P28072 239 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 NPBWR2P48146 333 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 SLC10A1Q14973 349 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 ACOT7LQ6ZUV0 252 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 ZNF611Q8N823 705 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 OR5M9Q8NGP3 310 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 MARS2Q96GW9 593 aaKnown RBP14.64□□□□□ -0.07
PHGDH-229ENST00000641891 PAPOLGQ9BWT3 736 aaKnown RBP14.64□□□□□ -0.07
PHGDH-229ENST00000641891 SPRR3Q9UBC9 169 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 ZNF629Q9UEG4 869 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-229ENST00000641891 DNAJC13O75165 2243 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 RRP8O43159 456 aaKnown RBP14.64□□□□□ -0.07
PHGDH-229ENST00000641891 UBA52P62987 128 aaKnown RBP14.64□□□□□ -0.07
PHGDH-229ENST00000641891 DAZAP2Q15038 168 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-229ENST00000641891 SLC25A26Q70HW3 274 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 VASH2Q86V25 355 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 MCEMP1Q8IX19 187 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 ZFP62Q8NB50 900 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-229ENST00000641891 PXT1Q8NFP0 134 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 OR1S1Q8NH92 325 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 MARVELD3Q96A59 401 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 OR10C1Q96KK4 312 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 NMES1Q9C002 83 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 LDAHQ9H6V9 325 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 ATPIF1Q9UII2 106 aa14.64□□□□□ -0.07
PHGDH-229ENST00000641891 MFSD2BA6NFX1 497 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 H0YIZ8 118 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 NGFP01138 241 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 CD46P15529 392 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 ARG2P78540 354 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 PMP22Q01453 160 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 Q6ZPA2 131 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 DCUN1D4Q92564 292 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 RNF126Q9BV68 326 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 REPIN1Q9BWE0 567 aaKnown RBP14.63□□□□□ -0.07
PHGDH-229ENST00000641891 ZNF471Q9BX82 626 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-229ENST00000641891 RAB18Q9NP72 206 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 IL36GQ9NZH8 169 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 SHOXO15266 292 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 OR5H8P0DN80 308 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 SPINK2P20155 84 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms