RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
SRRT-219ENST00000641476 DCLRE1BQ9H816 532 aa11.91□□□□□ -0.5
SRRT-219ENST00000641476 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRRT-219ENST00000641476 CLN6Q9NWW5 311 aa11.91□□□□□ -0.5
SRRT-219ENST00000641476 RASL12Q9NYN1 266 aa11.91□□□□□ -0.5
SRRT-219ENST00000641476 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
SRRT-219ENST00000641476 MRM2Q9UI43 246 aaKnown RBP11.91□□□□□ -0.5
SRRT-219ENST00000641476 OR52A1Q9UKL2 312 aa11.91□□□□□ -0.5
SRRT-219ENST00000641476 POLDIP2Q9Y2S7 368 aa11.91□□□□□ -0.5
SRRT-219ENST00000641476 A0A1B0GTI1 187 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 PQLC2LA1A4F0 135 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 DHRS7CA6NNS2 312 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 DLGAP1O14490 977 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 TSPAN9O75954 239 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 NXPH2O95156 264 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 EFNB1P98172 346 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 EGR3Q06889 387 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 KDM4DQ6B0I6 523 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 ZDHHC13Q8IUH4 622 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 BATF2Q8N1L9 274 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 ZNF561Q8N587 486 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 OR51G2Q8NGK0 314 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 OR14K1Q8NGZ2 314 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 CIB1Q99828 191 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 NRIP2Q9BQI9 281 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 SF3B6Q9Y3B4 125 aaKnown RBP11.9□□□□□ -0.5
SRRT-219ENST00000641476 SNX5Q9Y5X3 404 aa11.9□□□□□ -0.5
SRRT-219ENST00000641476 A6NIN4 97 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 H3BUX3 64 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 SLC1A7O00341 560 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 NOS1APO75052 506 aaPredicted RBP11.89□□□□□ -0.51
SRRT-219ENST00000641476 CSF1P09603 554 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 CCL1P22362 96 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 MPZP25189 248 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 TGFBR2P37173 567 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 RPL31P62899 125 aaKnown RBP11.89□□□□□ -0.51
SRRT-219ENST00000641476 Q6ZSR3 168 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 MKXQ8IYA7 352 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 MRAPQ8TCY5 172 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 TBX5Q99593 518 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 PPA2Q9H2U2 334 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 H2AFY2Q9P0M6 372 aaPredicted RBP11.89□□□□□ -0.51
SRRT-219ENST00000641476 ENOPH1Q9UHY7 261 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 SLC22A13Q9Y226 551 aa11.89□□□□□ -0.51
SRRT-219ENST00000641476 ANKRD61A6NGH8 418 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 RPP14O95059 124 aaKnown RBP11.88□□□□□ -0.51
SRRT-219ENST00000641476 APOL3O95236 402 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 CCL3L1P16619 93 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 PRDX2P32119 198 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 BMXP51813 675 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 ZNF273Q14593 569 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 LRRC75BQ2VPJ9 315 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
SRRT-219ENST00000641476 CALHM1Q8IU99 346 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 TRMT10AQ8TBZ6 339 aaKnown RBP11.88□□□□□ -0.51
SRRT-219ENST00000641476 RORBQ92753 470 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 AJUBAQ96IF1 538 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 SLC29A1Q99808 456 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 SSX3Q99909 188 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 OSBPL10Q9BXB5 764 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 PLEKHA1Q9HB21 404 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 OR14J1Q9UGF5 321 aa11.88□□□□□ -0.51
SRRT-219ENST00000641476 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.88□□□□□ -0.511e-16■□□□□ 10.7
SRRT-219ENST00000641476 TET2Q6N021 2002 aaPredicted RBP11.87□□□□□ -0.51
SRRT-219ENST00000641476 A0A1W2PPH5 198 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 H3BSH0 61 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 EI24O14681 340 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 KRT8P05787 483 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 COX7A1P24310 79 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 PAX6P26367 422 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 LY6EQ16553 131 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 ODF4Q2M2E3 257 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 SAMD5Q5TGI4 173 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 LPCAT4Q643R3 524 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 REC114Q7Z4M0 266 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 CATSPERDQ86XM0 798 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 CBR4Q8N4T8 237 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 C11orf42Q8N5U0 333 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 YIPF7Q8N8F6 280 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 OR4M1Q8NGD0 313 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 C9orf16Q9BUW7 83 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 GABARAPL3Q9BY60 117 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 PKIBQ9C010 78 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 USE1Q9NZ43 259 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 WARS2Q9UGM6 360 aaKnown RBP11.87□□□□□ -0.51
SRRT-219ENST00000641476 DSCAML1Q8TD84 2053 aa11.87□□□□□ -0.51
SRRT-219ENST00000641476 A0A1W2PQL4 384 aaPredicted RBP11.86□□□□□ -0.51
SRRT-219ENST00000641476 ATP6V1G2O95670 118 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 TK1P04183 234 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 ALPLP05186 524 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 PIPP12273 146 aaPredicted RBP11.86□□□□□ -0.51
SRRT-219ENST00000641476 PEX2P28328 305 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 HTR1FP30939 366 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 GABRA5P31644 462 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 ERVK11-1P61568 191 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 SLC34A1Q06495 639 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 IL24Q13007 206 aa11.86□□□□□ -0.51
SRRT-219ENST00000641476 RIPK1Q13546 671 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms