RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 BEND2Q8NDZ0 799 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 OR5R1Q8NH85 324 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 TRMT10AQ8TBZ6 339 aaKnown RBP11.34□□□□□ -0.59
LINC00339-211ENST00000641009 RORBQ92753 470 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 AJUBAQ96IF1 538 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 SSX3Q99909 188 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 RBM4BQ9BQ04 359 aaKnown RBP11.34□□□□□ -0.59
LINC00339-211ENST00000641009 TCF7L1Q9HCS4 588 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 POLDIP2Q9Y2S7 368 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 A0A1W2PQL4 384 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-211ENST00000641009 ANKRD61A6NGH8 418 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 TSPAN9O75954 239 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 KRT8P05787 483 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 CCL3L1P16619 93 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 LY6EQ16553 131 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 OR2T27Q8NH04 317 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 MMP27Q9H306 513 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 HES4Q9HCC6 221 aa11.33□□□□□ -0.6
LINC00339-211ENST00000641009 WARS2Q9UGM6 360 aaKnown RBP11.33□□□□□ -0.6
LINC00339-211ENST00000641009 FAM230AA0A1W2PPH8 454 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 DHRS7CA6NNS2 312 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 TSPAN15O95858 294 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 TK1P04183 234 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 CCL1P22362 96 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 MPZP25189 248 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 HTR1FP30939 366 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 BMXP51813 675 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 ZNF273Q14593 569 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 PDLIM3Q53GG5 364 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-211ENST00000641009 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 CATSPERDQ86XM0 798 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 PPP1R35Q8TAP8 253 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 RIBC2Q9H4K1 309 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 PLEKHA1Q9HB21 404 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 ENOPH1Q9UHY7 261 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 MEX3AA1L020 520 aaKnown RBP11.32□□□□□ -0.6
LINC00339-211ENST00000641009 F8VVB4 439 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 F8VWA3 439 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 SYT7O43581 403 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 OR2T7P0C7T2 308 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 PIPP12273 146 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-211ENST00000641009 FCGR1AP12314 374 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 COX7A1P24310 79 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 RASSF2P50749 326 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 ERVK11-1P61568 191 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 IL24Q13007 206 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 ZNF782Q6ZMW2 699 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-211ENST00000641009 OR10H4Q8NGA5 316 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 UBE2FQ969M7 185 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 GABARAPL3Q9BY60 117 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 PKIBQ9C010 78 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 MEGF9Q9H1U4 602 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 USE1Q9NZ43 259 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00339-211ENST00000641009 OAZ3Q9UMX2 235 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 SIGLEC9Q9Y336 463 aa11.32□□□□□ -0.6
LINC00339-211ENST00000641009 A0A1W2PPH5 198 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 METTL15A6NJ78 407 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 PLXNB1O43157 2135 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 INMTO95050 263 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 COL10A1Q03692 680 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 LRRC75BQ2VPJ9 315 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 PRSS35Q8N3Z0 413 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 ASCC1Q8N9N2 400 aaKnown RBP11.31□□□□□ -0.6
LINC00339-211ENST00000641009 SLAMF9Q96A28 289 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 EME1Q96AY2 570 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 FAM234AQ9H0X4 552 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 HEXA-AS1Q9H8Q6 139 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 MTCH1Q9NZJ7 389 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 SLC7A11Q9UPY5 501 aa11.31□□□□□ -0.6
LINC00339-211ENST00000641009 hCG_1809904A0A1W2PP81 198 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 A0A1W2PPE2 198 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 A0A1W2PR64 198 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 A0A1W2PRV1 198 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 SAC3D1A6NKF1 404 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 K7N7A8 449 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 SULT1C4O75897 302 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 GABRA5P31644 462 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 ATP6V1E1P36543 226 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 TP53I3Q53FA7 332 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 HIST2H2BDQ6DRA6 164 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 CRIP3Q6Q6R5 217 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 LHFPL4Q7Z7J7 247 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 CENPNQ96H22 339 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-211ENST00000641009 CEP19Q96LK0 163 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 OSBPL10Q9BXB5 764 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 FBLN5Q9UBX5 448 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 GNG8Q9UK08 70 aa11.3□□□□□ -0.6
LINC00339-211ENST00000641009 ATP5HO75947 161 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 KIR3DL2P43630 455 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 DLX6P56179 175 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 LGALS4P56470 323 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 ZNF85Q03923 595 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 FAM110DQ8TAY7 271 aaPredicted RBP11.29□□□□□ -0.6
LINC00339-211ENST00000641009 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms