RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 TRDV1A0A1B0GX56 115 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 TRIM64CA6NLI5 447 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 CEACAM18A8MTB9 384 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 GYPAP02724 150 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 RPS2P15880 293 aaKnown RBP12.74□□□□□ -0.37
PAX6-268ENST00000640287 MUC1P15941 1255 aaPredicted RBP12.74□□□□□ -0.37
PAX6-268ENST00000640287 IL2RGP31785 369 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 TEX36Q5VZQ5 186 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 C22orf42Q6IC83 251 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 FAM90A1Q86YD7 464 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 RASL12Q9NYN1 266 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 SSR3Q9UNL2 185 aa12.74□□□□□ -0.37
PAX6-268ENST00000640287 LOC100506127A0A0U1RQW1 187 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 MEGF11A6BM72 1044 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.73□□□□□ -0.37
PAX6-268ENST00000640287 FSTL3O95633 263 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 JUNBP17275 347 aaPredicted RBP12.73□□□□□ -0.37
PAX6-268ENST00000640287 BCL3P20749 454 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 MYL9P24844 172 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 OR3A4PP47883 348 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 TMEM249Q2WGJ8 235 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 CD200R1LQ6Q8B3 271 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 DCDC5Q6ZRR9 648 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 NLRC3Q7RTR2 1065 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 Q8IYB0 196 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 EMG1Q92979 244 aaKnown RBP12.73□□□□□ -0.37
PAX6-268ENST00000640287 C12orf43Q96C57 262 aaKnown RBP12.73□□□□□ -0.37
PAX6-268ENST00000640287 CHCHD6Q9BRQ6 235 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 OR51E2Q9H255 320 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 MIOXQ9UGB7 285 aa12.73□□□□□ -0.37
PAX6-268ENST00000640287 NKX6-3A6NJ46 265 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 ADAM20O43506 726 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 NDUFA2O43678 99 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 NOS1APO75052 506 aaPredicted RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 IGHV2-5P01817 119 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 INHBBP09529 407 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 GALP22466 123 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 GADD45AP24522 165 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 GABRA2P47869 451 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 NPBWR2P48146 333 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 ZP1P60852 638 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 RSU1Q15404 277 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 GLT8D1Q68CQ7 371 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 FIP1L1Q6UN15 594 aaKnown RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 ACP7Q6ZNF0 438 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 ZSCAN4Q8NAM6 433 aaPredicted RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 OR8B3Q8NGG8 313 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 OR8B2Q96RD0 313 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 TMUB1Q9BVT8 246 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 PATZ1Q9HBE1 687 aaKnown RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 OR14J1Q9UGF5 321 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 ING4Q9UNL4 249 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 GSTK1Q9Y2Q3 226 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 OR2AT4A6NND4 320 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 F8VVB4 439 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 F8VWA3 439 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 TMPRSS2O15393 492 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 ACAA1P09110 424 aaPredicted RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 CALCBP10092 127 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 PRKACAP17612 351 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 PTGFRP43088 359 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 SNU13P55769 128 aaKnown RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 LMO4P61968 165 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 TIMM50Q3ZCQ8 353 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 AWAT2Q6E213 333 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 CRIP3Q6Q6R5 217 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 LYPD2Q6UXB3 125 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 LRRTM1Q86UE6 522 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 NEIL1Q96FI4 390 aaPredicted RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 CCL13Q99616 98 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 CNTD2Q9H8S5 307 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 LPAR2Q9HBW0 351 aa12.72□□□□□ -0.37
PAX6-268ENST00000640287 TXNL4BQ9NX01 149 aaKnown RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 AK6Q9Y3D8 172 aaKnown RBP12.72□□□□□ -0.37
PAX6-268ENST00000640287 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 KDM4BO94953 1096 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 CDRT1O95170 752 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 IGKV1D-12P01611 117 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 PSG2P11465 335 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 ADRA2CP18825 462 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 ERVK11-1P61568 191 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 ESCO2Q56NI9 601 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 STUMQ69YW2 141 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 SLC36A1Q7Z2H8 476 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 C1QL2Q7Z5L3 287 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 CDH26Q8IXH8 852 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 FAM58AQ8N1B3 248 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 PXT1Q8NFP0 134 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 FOXRED1Q96CU9 486 aaPredicted RBP12.71□□□□□ -0.38
PAX6-268ENST00000640287 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 METTL9Q9H1A3 318 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 HES4Q9HCC6 221 aa12.71□□□□□ -0.38
PAX6-268ENST00000640287 MRPS28Q9Y2Q9 187 aaKnown RBP12.71□□□□□ -0.38
PAX6-268ENST00000640287 RFPL4AA6NLU0 287 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms