RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 NRTNQ99748 197 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 SCO1O75880 301 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 ACSM4P0C7M7 580 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 SRD5A2P31213 254 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 NDUFB6O95139 128 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 IGHV3-13P01766 116 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 IGHV3-7P01780 117 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 PRSS12P56730 875 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 KLF3P57682 345 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 RSPO4Q2I0M5 234 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 TMIGD3P0DMS9 266 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 COX7A1P24310 79 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 ACSM6Q6P461 480 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 TCTE3Q8IZS6 198 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
HNRNPU-226ENST00000640218 ZNF141Q15928 474 aa13.08□□□□□ -0.31
HNRNPU-226ENST00000640218 UQCC1Q9NVA1 299 aa13.08□□□□□ -0.31
HNRNPU-226ENST00000640218 OR5V1Q9UGF6 321 aa13.08□□□□□ -0.31
HNRNPU-226ENST00000640218 SPINK2P20155 84 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 AANATQ16613 207 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 KIAA1958Q8N8K9 716 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 GABRG3Q99928 467 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 SLIRPQ9GZT3 109 aaKnown RBP13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 CNTD2Q9H8S5 307 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 LHX9Q9NQ69 397 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 TCAPO15273 167 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 CTAG2O75638 210 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 CTLA4P16410 223 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 FGF9P31371 208 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 SOX8P57073 446 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 FAM3AP98173 230 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 FAM162BQ5T6X4 162 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 MOB1BQ7L9L4 216 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 OR2D2Q9H210 308 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 ZNF275Q9NSD4 429 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 CALCRP30988 508 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 MIDNQ504T8 468 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 TMED3Q9Y3Q3 217 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 KRTDAPP60985 99 aa13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 BCL2L2Q92843 193 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 SIRT3Q9NTG7 399 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-226ENST00000640218 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 TMEM147Q9BVK8 224 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 U3KQ87 197 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 SUMO1P63165 101 aaKnown RBP13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 RAB18Q9NP72 206 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 PJVKQ0ZLH3 352 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 PPP1R1AQ13522 171 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 ST3GAL2Q16842 350 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 RNASEK-C17orf49H0YIS7 233 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 TGOLN2O43493 480 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 ETFDHQ16134 617 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 DEGS2Q6QHC5 323 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 ZNF429Q86V71 674 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 MRGPRDQ8TDS7 321 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 CDC42EP2O14613 210 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 SFTA3P0C7M3 94 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 KCNJ3P48549 501 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 PTTG1IPP53801 180 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 JMJD6Q6NYC1 403 aaPredicted RBP13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 TMEM18Q96B42 140 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 CDX4O14627 284 aaPredicted RBP13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 PGA3P0DJD8 388 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 RD3LP0DJH9 198 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 RNF151Q2KHN1 245 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 RHBDD2Q6NTF9 364 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 OR6S1Q8NH40 331 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 RASL12Q9NYN1 266 aa13.07□□□□□ -0.32
HNRNPU-226ENST00000640218 TNFSF14O43557 240 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 SFT2D2O95562 160 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 SLC38A11Q08AI6 406 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 ZIC1Q15915 447 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 C17orf47Q8NEP4 570 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 MTFP1Q9UDX5 166 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 GP1BAP07359 652 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 SPP1P10451 314 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 PAX5Q02548 391 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 SSX1Q16384 188 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 C3AR1Q16581 482 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 OR5D13Q8NGL4 314 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 ASB10Q8WXI3 467 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 C12orf10Q9HB07 376 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 SMCHD1A6NHR9 2005 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 C9orf170A2RU37 121 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 RAB7AP51149 207 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 GAL3ST2Q9H3Q3 398 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 IL36GQ9NZH8 169 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 ATG2BQ96BY7 2078 aa13.06□□□□□ -0.32
HNRNPU-226ENST00000640218 LOC102723971A0A1B0GUV8 181 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms