RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PIP4P1Q86T03 277 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 FBXL14Q8N1E6 418 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 SULT4A1Q9BR01 284 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 PRR13Q9NZ81 148 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 GPR160Q9UJ42 338 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 RRADP55042 308 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 BRICD5Q6PL45 260 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 GLRX5Q86SX6 157 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 CALHM1Q8IU99 346 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 OR10AD1Q8NGE0 317 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 OR56B2PQ8NGI1 322 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 MICU1Q9BPX6 476 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 CMSS1Q9BQ75 279 aaKnown RBP18.59■□□□□ 0.57
CLN6-224ENST00000638076 REPIN1Q9BWE0 567 aaKnown RBP18.59■□□□□ 0.57
CLN6-224ENST00000638076 IL36GQ9NZH8 169 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 ANXA10Q9UJ72 324 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 ST3GAL6Q9Y274 331 aa18.59■□□□□ 0.57
CLN6-224ENST00000638076 COX5BP10606 129 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 RAB1AP62820 205 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 ZNF345Q14585 488 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 RNFT1Q5M7Z0 435 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 TMPRSS7Q7RTY8 843 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 DEFB124Q8NES8 71 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 THAP6Q8TBB0 222 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 ZNF2Q9BSG1 426 aaPredicted RBP18.58■□□□□ 0.57
CLN6-224ENST00000638076 C12orf49Q9H741 205 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 EDARQ9UNE0 448 aa18.58■□□□□ 0.57
CLN6-224ENST00000638076 RRP8O43159 456 aaKnown RBP18.58■□□□□ 0.56
CLN6-224ENST00000638076 OR2F2O95006 317 aa18.58■□□□□ 0.56
CLN6-224ENST00000638076 OR2F1Q13607 317 aa18.58■□□□□ 0.56
CLN6-224ENST00000638076 KCNRGQ8N5I3 272 aa18.58■□□□□ 0.56
CLN6-224ENST00000638076 DYRK2Q92630 601 aa18.58■□□□□ 0.56
CLN6-224ENST00000638076 MRPS24Q96EL2 167 aaKnown RBP18.58■□□□□ 0.56
CLN6-224ENST00000638076 PAPOLGQ9BWT3 736 aaKnown RBP18.58■□□□□ 0.56
CLN6-224ENST00000638076 PRSS50Q9UI38 385 aa18.58■□□□□ 0.56
CLN6-224ENST00000638076 RNF222A6NCQ9 220 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 POM121CA8CG34 1229 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 I3L521 148 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 NMBP08949 121 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 PGAM2P15259 253 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 CALCRP30988 508 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 OPRM1P35372 400 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 SURF2Q15527 256 aaPredicted RBP18.57■□□□□ 0.56
CLN6-224ENST00000638076 ZNF611Q8N823 705 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 WDYHV1Q96HA8 205 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 VRK1Q99986 396 aaPredicted RBP18.57■□□□□ 0.56
CLN6-224ENST00000638076 PARD6AQ9NPB6 346 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 SPRR3Q9UBC9 169 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 TRGV5A0A0B4J1U4 118 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 CDK2AP1O14519 115 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 CRHP06850 196 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 ARR3P36575 388 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 PDCD1Q15116 288 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 AANATQ16613 207 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 ANKRD55Q3KP44 614 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 BEX5Q5H9J7 111 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 ANGPTL6Q8NI99 470 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 NMES1Q9C002 83 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 ZNF552Q9H707 407 aaPredicted RBP18.57■□□□□ 0.56
CLN6-224ENST00000638076 CHMP1AQ9HD42 196 aaPredicted RBP18.57■□□□□ 0.56
CLN6-224ENST00000638076 MBD2Q9UBB5 411 aa18.57■□□□□ 0.56
CLN6-224ENST00000638076 A0A0B4J2A0 478 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 ADAP1O75689 374 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 KNG1P01042 644 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 FCGR3AP08637 254 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 NSUN5P2Q63ZY6 315 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 ACOT7LQ6ZUV0 252 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 SLC25A26Q70HW3 274 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 VASH2Q86V25 355 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 BATF2Q8N1L9 274 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 APOBEC3DQ96AK3 386 aaPredicted RBP18.56■□□□□ 0.56
CLN6-224ENST00000638076 SHPKQ9UHJ6 478 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 C14orf166Q9Y224 244 aaKnown RBP18.56■□□□□ 0.56
CLN6-224ENST00000638076 CSAG2Q9Y5P2 127 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 KANTRA0A1W2PQU2 76 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 RLN2P04090 185 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 FTH1P19P0C7X4 201 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 RPS2P15880 293 aaKnown RBP18.56■□□□□ 0.56
CLN6-224ENST00000638076 DTYMKP23919 212 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 CD82P27701 267 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 PSMB6P28072 239 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 MALLQ13021 153 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 MRPL21Q7Z2W9 205 aaKnown RBP18.56■□□□□ 0.56
CLN6-224ENST00000638076 TMEM178AQ8NBL3 297 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 CXorf58Q96LI9 332 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 WDR13Q9H1Z4 485 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 RAB18Q9NP72 206 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 PCDHB16Q9NRJ7 776 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 CRIM1Q9NZV1 1036 aa18.56■□□□□ 0.56
CLN6-224ENST00000638076 SPAARA0A1B0GVQ0 90 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 CDRT15L2A8MXV6 281 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 PDGFAP04085 211 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 PRDX4Q13162 271 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 MARVELD3Q96A59 401 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 POM121L2Q96KW2 1035 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 NGFP01138 241 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 OR5H8P0DN80 308 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 NPBWR2P48146 333 aa18.55■□□□□ 0.56
CLN6-224ENST00000638076 RBM11P57052 281 aaKnown RBP18.55■□□□□ 0.56
CLN6-224ENST00000638076 UBA52P62987 128 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms