RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CCR5P51681 352 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 ERVS71-1P61550 626 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 UBR2Q8IWV8 1755 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 CIDEAO60543 219 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 OR8A1Q8NGG7 326 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 ASB1Q9Y576 335 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 DCTDP32321 178 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 RELAQ04206 551 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 ENDOGQ14249 297 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 ZNF441Q8N8Z8 693 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 DCTN5Q9BTE1 182 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 OR2J1Q9GZK6 312 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 DUSP22Q9NRW4 184 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 MTCH2Q9Y6C9 303 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 CDK5RAP2Q96SN8 1893 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 TEX50A0A1B0GTY4 177 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 PNPP00491 289 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 SSPNQ14714 243 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 FAM222BQ8WU58 562 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 MASP2O00187 686 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 SLC17A1Q14916 467 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 CYS1Q717R9 158 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 GALR1P47211 349 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 INPP5JQ15735 1006 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 SLC25A35Q3KQZ1 300 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 GUCD1Q96NT3 240 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 VAMP5O95183 116 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 CLEC2AQ6UVW9 174 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 AKAP12Q02952 1782 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 TOX3O15405 576 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 ETHE1O95571 254 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 CCR9P51686 369 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 STAC2Q6ZMT1 411 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 DYRK2Q92630 601 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 EVA1AQ9H8M9 152 aa15.9■□□□□ 0.14
CACNA1A-227ENST00000636549 HIST1H3AP68431 136 aa15.89■□□□□ 0.14
CACNA1A-227ENST00000636549 SSMEM1Q8WWF3 244 aa15.89■□□□□ 0.14
CACNA1A-227ENST00000636549 MCHR2Q969V1 340 aa15.89■□□□□ 0.14
CACNA1A-227ENST00000636549 DERL3Q96Q80 235 aa15.89■□□□□ 0.14
CACNA1A-227ENST00000636549 LPAR5Q9H1C0 372 aa15.89■□□□□ 0.14
CACNA1A-227ENST00000636549 FBP1P09467 338 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 PRSS8Q16651 343 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 PERPQ96FX8 193 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 PDLIM5Q96HC4 596 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 HSBP1O75506 76 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 COL9A1P20849 921 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 PRNTQ86SH4 94 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 GPX8Q8TED1 209 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 SCGB1A1P11684 91 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 OR4B1Q8NGF8 309 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 OR13G1Q8NGZ3 307 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 ARHGAP5-AS1Q96IT6 56 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 SPNS1Q9H2V7 528 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 M0R3E3 92 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 ZNF324O75467 553 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 EPXP11678 715 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 PNLIPP16233 465 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 PAFAH1B2P68402 229 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 INSL4Q14641 139 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 GPX7Q96SL4 187 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 A0A087WUJ7 227 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 D2HGDHQ8N465 521 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 KLK11Q9UBX7 282 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 INSIG2Q9Y5U4 225 aa15.89■□□□□ 0.13
CACNA1A-227ENST00000636549 SIGLEC1Q9BZZ2 1709 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 PRSS44E7EML9 344 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 OR4E1P0C645 316 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 LGALSLQ3ZCW2 172 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 FCRL6Q6DN72 434 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 ZNF416Q9BWM5 594 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 RPLP1P05386 114 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 BRS3P32247 399 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 KCNMB1Q16558 191 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 MBTPS2O43462 519 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 AFMIDQ63HM1 303 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 PTX4Q96A99 478 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 HOXB3P14651 431 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 THBS4P35443 961 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 CEACAM3P40198 252 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 GNG3P63215 75 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 ZNF117Q03924 483 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 AMMECR1LQ6DCA0 310 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 MAP6Q96JE9 813 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 CCL19Q99731 98 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 OPN3Q9H1Y3 402 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 TECRQ9NZ01 308 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 NSG2Q9Y328 171 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 SELENOKQ9Y6D0 94 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 ACSM4P0C7M7 580 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 GCAP28676 217 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 C19orf54Q5BKX5 351 aa15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 AURKAIP1Q9NWT8 199 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-227ENST00000636549 IGHV3-23P01764 117 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 AVPR2P30518 371 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 CHRDL1Q9BU40 450 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 GSTZ1O43708 216 aaPredicted RBP15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 TOMM20LQ6UXN7 152 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 ADAMTS17Q8TE56 1095 aa15.87■□□□□ 0.13
CACNA1A-227ENST00000636549 ATP5SQ99766 215 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms