RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PLSCR2Q9NRY7 297 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 J3QT63 122 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 GAPDHP04406 335 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF44P15621 663 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 P2RY4P51582 365 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 PDZK1IP1Q13113 114 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 MICBQ29980 383 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 NHLRC3Q5JS37 347 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 HES3Q5TGS1 186 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SGK3Q96BR1 496 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 NAA60Q9H7X0 242 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 MYEF2Q9P2K5 600 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 PCDHB10Q9UN67 800 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 PATE3B3GLJ2 98 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 EFSO43281 561 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 EFNA2O43921 213 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 DBHP09172 617 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 VSIG10L2P0DP72 767 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 NOVA1P51513 510 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 PSG4Q00888 419 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TAF9Q16594 264 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 PXDC1Q5TGL8 231 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SLC25A26Q70HW3 274 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 EXTL1Q92935 676 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 GCDHQ92947 438 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 MUCL1Q96DR8 90 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 C1QTNF5Q9BXJ0 243 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SMDT1Q9H4I9 107 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SH2D2AQ9NP31 389 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 NGBQ9NPG2 151 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SDHAF2Q9NX18 166 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TNFSF4P23510 183 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 CEACAM21Q3KPI0 293 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 EIF4E3Q8N5X7 224 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 C1orf162Q8NEQ5 155 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ST8SIA4Q92187 359 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ANAPC10Q9UM13 185 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 AUP1Q9Y679 476 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 FAM166BA8MTA8 275 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 H7C2Y5 167 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 BET1O15155 118 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TSPAN15O95858 294 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 CRYGSP22914 178 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TAGLN2P37802 199 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ELP2Q6IA86 826 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ALKAL2Q6UX46 152 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 FBXL14Q8N1E6 418 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 GALNT14Q96FL9 552 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 NUP214P35658 2090 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SH2D1BO14796 132 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SYNGR3O43761 229 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TSPAN9O75954 239 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 DKK1O94907 266 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TDGF1P13385 188 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TAGLNQ01995 201 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 CSRP2Q16527 193 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 AANATQ16613 207 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SLC22A25Q6T423 547 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 OR4S1Q8NGB4 309 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 PROCRQ9UNN8 238 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 MYO9BQ13459 2157 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 URB1O60287 2271 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 C5orf49A4QMS7 147 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 RPL12P30050 165 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 RBM11P57052 281 aaKnown RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 HBG1P69891 147 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 HBG2P69892 147 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 P2RY6Q15077 328 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 OR8G1Q15617 311 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 BEND4Q6ZU67 534 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF611Q8N823 705 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 STARD10Q9Y365 291 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 CSAG2Q9Y5P2 127 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 KPTNQ9Y664 436 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SIX6O95475 246 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SCGB1D2O95969 90 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TMIGD3P0DMS9 266 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 P2RY1P47900 373 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 LUMP51884 338 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-210ENST00000635776 F2RL1P55085 397 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 FGF12P61328 243 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 BAXQ07812 192 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 UNC119Q13432 240 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 CLEC18BQ6UXF7 455 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ASCL4Q6XD76 172 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 AKR7LQ8NHP1 331 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 SEC22AQ96IW7 307 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 UCN2Q96RP3 112 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 TREM1Q9NP99 234 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ANKRD10Q9NXR5 420 aa3.98□□□□□ -1.77
SCN1A-210ENST00000635776 ARGFXA6NJG6 315 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF716A6NP11 495 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 SMLR1H3BR10 107 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 SOCS1O15524 211 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PLATP00750 562 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 COL9A2Q14055 689 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF718Q3SXZ3 478 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 NHLRC1Q6VVB1 395 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM251Q8N6I4 163 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms