RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 C9orf106Q8NAJ2 232 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 C1orf162Q8NEQ5 155 aaPredicted RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 OR5M9Q8NGP3 310 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 HPSE2Q8WWQ2 592 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 CYYR1Q96J86 154 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 GPR132Q9UNW8 380 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 ST3GAL6Q9Y274 331 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 C9orf170A2RU37 121 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 KLK10O43240 276 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 SFTPBP07988 381 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 ZNF35P13682 527 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 HLA-GP17693 338 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 FPR2P25090 351 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 SRSF4Q08170 494 aaKnown RBP18.98■□□□□ 0.63
PNKP-220ENST00000627232 PPP1R1AQ13522 171 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 C11orf88Q6PI97 169 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 SLC25A26Q70HW3 274 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 TMEM185AQ8NFB2 350 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 MARCH1Q8TCQ1 289 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 HIST1H2AAQ96QV6 131 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 FGF23Q9GZV9 251 aaPredicted RBP18.98■□□□□ 0.63
PNKP-220ENST00000627232 PPA2Q9H2U2 334 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 FN3KRPQ9HA64 309 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 ZNF701Q9NV72 531 aaPredicted RBP18.98■□□□□ 0.63
PNKP-220ENST00000627232 ZNF230Q9UIE0 474 aaPredicted RBP18.98■□□□□ 0.63
PNKP-220ENST00000627232 OSGIN2Q9Y236 505 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 DOCK7Q96N67 2140 aa18.98■□□□□ 0.63
PNKP-220ENST00000627232 ANKRD30BLA7E2S9 258 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 GEMIN2O14893 280 aaKnown RBP18.97■□□□□ 0.63
PNKP-220ENST00000627232 ZNHIT1O43257 154 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 TOXO94900 526 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 SIX6O95475 246 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 COX5AP20674 150 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 PIGYQ3MUY2 71 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 RFPL4BQ6ZWI9 263 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 OVCH2Q7RTZ1 564 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 PEG10Q86TG7 708 aaKnown RBP18.97■□□□□ 0.63
PNKP-220ENST00000627232 OR10AD1Q8NGE0 317 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 OR13G1Q8NGZ3 307 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 MITD1Q8WV92 249 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 CMSS1Q9BQ75 279 aaKnown RBP18.97■□□□□ 0.63
PNKP-220ENST00000627232 FAAP24Q9BTP7 215 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 COL25A1Q9BXS0 654 aaPredicted RBP18.97■□□□□ 0.63
PNKP-220ENST00000627232 EHFQ9NZC4 300 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 CRIM1Q9NZV1 1036 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 AK3Q9UIJ7 227 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 FREM2Q5SZK8 3169 aa18.97■□□□□ 0.63
PNKP-220ENST00000627232 PLSCR5A0PG75 271 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 TPD52L2O43399 206 aaKnown RBP18.96■□□□□ 0.63
PNKP-220ENST00000627232 PDCD6O75340 191 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 C4BPBP20851 252 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 SURF2Q15527 256 aaPredicted RBP18.96■□□□□ 0.63
PNKP-220ENST00000627232 MKXQ8IYA7 352 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 CNEP1R1Q8N9A8 125 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 OR5M8Q8NGP6 311 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 SNIP1Q8TAD8 396 aaKnown RBP18.96■□□□□ 0.63
PNKP-220ENST00000627232 SULT4A1Q9BR01 284 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 CDH20Q9HBT6 801 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 PLSCR4Q9NRQ2 329 aa18.96■□□□□ 0.63
PNKP-220ENST00000627232 NOP16Q9Y3C1 178 aaKnown RBP18.96■□□□□ 0.63
PNKP-220ENST00000627232 CNOT1A5YKK6 2376 aaKnown RBP18.96■□□□□ 0.63
PNKP-220ENST00000627232 OR5B21A6NL26 309 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 HMSDA8MTL9 139 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 ZNF732B4DXR9 585 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 ECI1P42126 302 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 GPM6AP51674 278 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 IL13RA1P78552 427 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 NHLRC3Q5JS37 347 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 LY6G6FQ5SQ64 297 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 DCAF12L2Q5VW00 463 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 FBXW12Q6X9E4 464 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 SLC7A5P1Q8MH63 180 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 ADAD2Q8NCV1 583 aaKnown RBP18.95■□□□□ 0.62
PNKP-220ENST00000627232 OR5P3Q8WZ94 311 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 PHB2Q99623 299 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 LYZL6O75951 148 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 DUS4LO95620 317 aaKnown RBP18.95■□□□□ 0.62
PNKP-220ENST00000627232 FUT3P21217 361 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 HAAOP46952 286 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 ZNF81P51508 661 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 PER3P56645 1201 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 TMEM128Q5BJH2 165 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 LIN54Q6MZP7 749 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 MAFIPQ8WZ33 124 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 WDR89Q96FK6 387 aaPredicted RBP18.95■□□□□ 0.62
PNKP-220ENST00000627232 SLC23A1Q9UHI7 598 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 ANXA10Q9UJ72 324 aa18.95■□□□□ 0.62
PNKP-220ENST00000627232 MBD3L4A6NDZ8 208 aaPredicted RBP18.94■□□□□ 0.62
PNKP-220ENST00000627232 MBD3L3A6NE82 208 aaPredicted RBP18.94■□□□□ 0.62
PNKP-220ENST00000627232 MBD3L5A6NJ08 208 aaPredicted RBP18.94■□□□□ 0.62
PNKP-220ENST00000627232 CBR1P16152 277 aa18.94■□□□□ 0.62
PNKP-220ENST00000627232 AKR1C4P17516 323 aa18.94■□□□□ 0.62
PNKP-220ENST00000627232 FGF12P61328 243 aa18.94■□□□□ 0.62
PNKP-220ENST00000627232 AADACL3Q5VUY0 350 aa18.94■□□□□ 0.62
PNKP-220ENST00000627232 VWA1Q6PCB0 445 aa18.94■□□□□ 0.62
PNKP-220ENST00000627232 NAXEQ8NCW5 288 aa18.94■□□□□ 0.62
PNKP-220ENST00000627232 MBD3L2Q8NHZ7 208 aaPredicted RBP18.94■□□□□ 0.62
PNKP-220ENST00000627232 HDHD3Q9BSH5 251 aaPredicted RBP18.94■□□□□ 0.62
PNKP-220ENST00000627232 C5orf66Q9H5L9 145 aa18.94■□□□□ 0.62
PNKP-220ENST00000627232 HEXA-AS1Q9H8Q6 139 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms