RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 RIMS4Q9H426 269 aaPredicted RBP12.2□□□□□ -0.46
UBE3A-209ENST00000625778 CUTCQ9NTM9 273 aa12.2□□□□□ -0.46
UBE3A-209ENST00000625778 DOK5Q9P104 306 aa12.2□□□□□ -0.46
UBE3A-209ENST00000625778 MCTS1Q9ULC4 181 aaKnown RBP12.2□□□□□ -0.46
UBE3A-209ENST00000625778 CBY1Q9Y3M2 126 aa12.2□□□□□ -0.46
UBE3A-209ENST00000625778 PIAS3Q9Y6X2 628 aa12.2□□□□□ -0.46
UBE3A-209ENST00000625778 MMP7P09237 267 aaPredicted RBP12.19□□□□□ -0.46
UBE3A-209ENST00000625778 FOXF1Q12946 379 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 TAF9Q16594 264 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 PCK2Q16822 640 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 FBXW12Q6X9E4 464 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 SPNS3Q6ZMD2 512 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 TMEM217Q8N7C4 229 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 KDF1Q8NAX2 398 aaPredicted RBP12.19□□□□□ -0.46
UBE3A-209ENST00000625778 PBDC1Q9BVG4 233 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 PECRQ9BY49 303 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 MAGT1Q9H0U3 335 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 SHANK1Q9Y566 2161 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 IGKV1-9A0A0C4DH69 117 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 A6NNC1 897 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 NPIPB7O75200 414 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 ONECUT2O95948 504 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 HTR5AP47898 357 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 EFNA3P52797 238 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 OR52M1Q8NGK5 317 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 TCTN2Q96GX1 697 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 GNRHR2Q96P88 292 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 FAAP24Q9BTP7 215 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 STARD10Q9Y365 291 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 SDK2Q58EX2 2172 aa12.19□□□□□ -0.46
UBE3A-209ENST00000625778 FIGNL2A6NMB9 653 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 LINC01565O15544 149 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 CYB5BO43169 146 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 OR5H8P0DN80 308 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 GABREP78334 506 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 LRRC18Q8N456 261 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 OR11L1Q8NGX0 322 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 LMX1AQ8TE12 382 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 C1orf147Q96MC9 270 aaPredicted RBP12.18□□□□□ -0.46
UBE3A-209ENST00000625778 GPHA2Q96T91 129 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 VN1R1Q9GZP7 353 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 LHFPL6Q9Y693 200 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 IFI6P09912 130 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 LYL1P12980 280 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 TLE1Q04724 770 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 CHST11Q9NPF2 352 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 KLRF1Q9NZS2 232 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 LIPGQ9Y5X9 500 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 TGIF2-C20orf24A0A0A6YYL0 155 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 E9PLN8 166 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 MASP2O00187 686 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 PPIHO43447 177 aaKnown RBP12.18□□□□□ -0.46
UBE3A-209ENST00000625778 DANCRP0C864 163 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 THBS4P35443 961 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 FAM3AP98173 230 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 LHFPL1Q86WI0 220 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 OR2G3Q8NGZ4 309 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 CCDC74BQ96LY2 380 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 SERINC1Q9NRX5 453 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 KCNIP3Q9Y2W7 256 aa12.18□□□□□ -0.46
UBE3A-209ENST00000625778 FAM24AA6NFZ4 105 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 SPRY1O43609 319 aaPredicted RBP12.17□□□□□ -0.46
UBE3A-209ENST00000625778 ZNF239Q16600 458 aaKnown RBP12.17□□□□□ -0.46
UBE3A-209ENST00000625778 DEFB133Q30KQ1 61 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 TMEM240Q5SV17 173 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 REC114Q7Z4M0 266 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 RTN4IP1Q8WWV3 396 aaPredicted RBP12.17□□□□□ -0.46
UBE3A-209ENST00000625778 FAM230AA0A1W2PPH8 454 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 TSPAN2O60636 221 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 CXCL1P09341 107 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 MYF5P13349 255 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 IL15RAQ13261 267 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 FZD2Q14332 565 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 AKR1C8PQ5T2L2 129 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 TMEM234Q8WY98 164 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 RAB39BQ96DA2 213 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 SIRT7Q9NRC8 400 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 POMT1Q9Y6A1 747 aa12.17□□□□□ -0.46
UBE3A-209ENST00000625778 IFITM10A6NMD0 228 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 E5RGE8 158 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 FTCDNL1E5RQL4 147 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 PHF1O43189 567 aaPredicted RBP12.16□□□□□ -0.46
UBE3A-209ENST00000625778 IGKV3-11P04433 115 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 DEGS2Q6QHC5 323 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 UEVLDQ8IX04 471 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 TAAR9Q96RI9 348 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 NSG2Q9Y328 171 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 VSTM2BA6NLU5 285 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 H3BQ15 152 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 CST7O76096 145 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 TRGC2P03986 189 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 RABIFP47224 123 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 AFF3P51826 1226 aaKnown RBP12.16□□□□□ -0.46
UBE3A-209ENST00000625778 NKX6-1P78426 367 aaPredicted RBP12.16□□□□□ -0.46
UBE3A-209ENST00000625778 LRRC61Q9BV99 259 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 PRDM13Q9H4Q3 707 aa12.16□□□□□ -0.46
UBE3A-209ENST00000625778 GPR173Q9NS66 373 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms