RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 NECAP2Q9NVZ3 263 aa11.7□□□□□ -0.54
TUBB3-215ENST00000625617 PITPNC1Q9UKF7 332 aa11.7□□□□□ -0.54
TUBB3-215ENST00000625617 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.7□□□□□ -0.54
TUBB3-215ENST00000625617 TBL2Q9Y4P3 447 aaKnown RBP11.7□□□□□ -0.54
TUBB3-215ENST00000625617 PQLC2LA1A4F0 135 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 CCDC182A6NF36 153 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 LOC110117498-PIK3R3F6TDL0 507 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 TTRP02766 147 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 SNAPC1Q16533 368 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 ARSJQ5FYB0 599 aaPredicted RBP11.69□□□□□ -0.54
TUBB3-215ENST00000625617 TMEM236Q5W0B7 351 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 ASRGL1Q7L266 308 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 CALHM1Q8IU99 346 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 HS3ST5Q8IZT8 346 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 DYNAPQ8N1N2 210 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 ASCC1Q8N9N2 400 aaKnown RBP11.69□□□□□ -0.54
TUBB3-215ENST00000625617 OR13D1Q8NGV5 346 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 CNN2Q99439 309 aaKnown RBP11.69□□□□□ -0.54
TUBB3-215ENST00000625617 CITED2Q99967 270 aaPredicted RBP11.69□□□□□ -0.54
TUBB3-215ENST00000625617 PRSS22Q9GZN4 317 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 HES4Q9HCC6 221 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 COPS3Q9UNS2 423 aa11.69□□□□□ -0.54
TUBB3-215ENST00000625617 A6NDX4 124 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 C17orf98A8MV24 154 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 F2RL2O00254 374 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 DLGAP1O14490 977 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 RBP4P02753 201 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 ZNF728P0DKX0 622 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 ANXA8P13928 327 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 CALB2P22676 271 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 MPZP25189 248 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 RAB13P51153 203 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 DLX6P56179 175 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 LOXL3P58215 753 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 SSX2Q16385 188 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 BCL2L15Q5TBC7 163 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 ZNF626Q68DY1 528 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 TMEM42Q69YG0 159 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 CCBE1Q6UXH8 406 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-215ENST00000625617 PHF21AQ96BD5 680 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 MALSU1Q96EH3 234 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 NSL1Q96IY1 281 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 OR5M11Q96RB7 305 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-215ENST00000625617 TVP23BQ9NYZ1 205 aa11.68□□□□□ -0.54
TUBB3-215ENST00000625617 MEX3AA1L020 520 aaKnown RBP11.67□□□□□ -0.54
TUBB3-215ENST00000625617 K7N7A8 449 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 ALDOBP05062 364 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 HOXB6P17509 224 aaKnown RBP11.67□□□□□ -0.54
TUBB3-215ENST00000625617 EDDM3BP56851 147 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 COL10A1Q03692 680 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 DYNC1I2Q13409 638 aaKnown RBP11.67□□□□□ -0.54
TUBB3-215ENST00000625617 ZNF322Q6U7Q0 402 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-215ENST00000625617 WIPF2Q8TF74 440 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-215ENST00000625617 CANT1Q8WVQ1 401 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 SLC22A13Q9Y226 551 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 R4GMQ9 66 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 V9GYS6 101 aa11.67□□□□□ -0.54
TUBB3-215ENST00000625617 AQP12BA6NM10 295 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 DHRS7CA6NNS2 312 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
TUBB3-215ENST00000625617 IGHV1-8P0DP01 117 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 PRKACGP22612 351 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 VDAC2P45880 294 aaPredicted RBP11.66□□□□□ -0.54
TUBB3-215ENST00000625617 DYNLT3P51808 116 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 GYS2P54840 703 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 OR12D2P58182 307 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 IL24Q13007 206 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 LDLRAD2Q5SZI1 272 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 GDPD3Q7L5L3 318 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 AQP12AQ8IXF9 295 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 ELMOD2Q8IZ81 293 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 TRMT10AQ8TBZ6 339 aaKnown RBP11.66□□□□□ -0.54
TUBB3-215ENST00000625617 DNAJC9Q8WXX5 260 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 ZNF714Q96N38 554 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 PRRG3Q9BZD7 231 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 PKIBQ9C010 78 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 PLEKHA1Q9HB21 404 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 PAPOLBQ9NRJ5 636 aaKnown RBP11.66□□□□□ -0.54
TUBB3-215ENST00000625617 OR52A1Q9UKL2 312 aa11.66□□□□□ -0.54
TUBB3-215ENST00000625617 NOTCH3Q9UM47 2321 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 A6NIN4 97 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 ZNF737O75373 536 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 DNAJC8O75937 253 aaPredicted RBP11.65□□□□□ -0.54
TUBB3-215ENST00000625617 CHRM2P08172 466 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 CXCR4P61073 352 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 ACTR3P61158 418 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 EDDM3AQ14507 147 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 PLEKHG7Q6ZR37 379 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 ANGPTL5Q86XS5 388 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 SLC35F2Q8IXU6 374 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 OR8H2Q8N162 312 aa11.65□□□□□ -0.54
TUBB3-215ENST00000625617 OR14K1Q8NGZ2 314 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms