RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SUCLG1P53597 346 aaKnown RBP13.36□□□□□ -0.27
PMS1-221ENST00000624204 PIGPP57054 158 aa13.36□□□□□ -0.27
PMS1-221ENST00000624204 SLC37A1P57057 533 aa13.36□□□□□ -0.27
PMS1-221ENST00000624204 RAP1BP61224 184 aa13.36□□□□□ -0.27
PMS1-221ENST00000624204 FOXK1P85037 733 aa13.36□□□□□ -0.27
PMS1-221ENST00000624204 ZNF117Q03924 483 aa13.36□□□□□ -0.27
PMS1-221ENST00000624204 OR5L1Q8NGL2 311 aa13.36□□□□□ -0.27
PMS1-221ENST00000624204 GPR87Q9BY21 358 aa13.36□□□□□ -0.27
PMS1-221ENST00000624204 NXF5Q9H1B4 397 aaKnown RBP13.36□□□□□ -0.27
PMS1-221ENST00000624204 NXT1Q9UKK6 140 aaKnown RBP13.36□□□□□ -0.27
PMS1-221ENST00000624204 TDRD6O60522 2096 aaKnown RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 IGKV1D-8A0A087WSZ0 117 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 ABCA11PQ4W5N1 156 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 OGFOD3Q6PK18 319 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 SHISA6Q6ZSJ9 500 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 LANCL3Q6ZV70 420 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 OR5R1Q8NH85 324 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 ARHGAP21Q5T5U3 1957 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 IGKV1D-43A0A0B4J1Z2 117 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 MKRN2OSH3BPM6 223 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 TNFSF14O43557 240 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 OR5AC1P0C628 307 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 RRADP55042 308 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 RPL23AP62750 156 aaKnown RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 SLC10A1Q14973 349 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 OR52M1Q8NGK5 317 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 RAB24Q969Q5 203 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 SLAMF6Q96DU3 332 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 CCDC187A0A096LP49 1063 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 FUT3P21217 361 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 ATP6V0CP27449 155 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 PCP4P48539 62 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 RAB11AP62491 216 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 RPS21P63220 83 aaKnown RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 GPM6BQ13491 265 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 FZD2Q14332 565 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 JOSD1Q15040 202 aaPredicted RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.35□□□□□ -0.27
PMS1-221ENST00000624204 C16orf47Q6ZP98 133 aaPredicted RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 BAHD1Q8TBE0 780 aaPredicted RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 DYRK2Q92630 601 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 MMABQ96EY8 250 aaPredicted RBP13.35□□□□□ -0.27
PMS1-221ENST00000624204 FAM60AQ9NP50 221 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 SLC7A11Q9UPY5 501 aa13.35□□□□□ -0.27
PMS1-221ENST00000624204 SHANK1Q9Y566 2161 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 A0A087WWC5 75 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 GP1BBP13224 206 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 WDR25Q64LD2 544 aaPredicted RBP13.34□□□□□ -0.27
PMS1-221ENST00000624204 C5orf24Q7Z6I8 188 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 OR13D1Q8NGV5 346 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 FAM24AA6NFZ4 105 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 NPIPA5E9PKD4 350 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 CST7O76096 145 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 CXCL10P02778 98 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 MMP16P51512 607 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 DEFB118Q96PH6 123 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 CBLN4Q9NTU7 201 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 FAM206AQ9NX38 181 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 NPIPA1Q9UND3 350 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 VDAC3Q9Y277 283 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 KIAA2026Q5HYC2 2103 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 THSD7BQ9C0I4 1608 aa13.34□□□□□ -0.27
PMS1-221ENST00000624204 PRR19A6NJB7 356 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 ZFP92A6NM28 416 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 DHRS7CA6NNS2 312 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 ST8SIA3O43173 380 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 HPNP05981 417 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 TMEM225BP0DP42 221 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 ALDH3B1P43353 468 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 NOL4LQ96MY1 436 aaPredicted RBP13.33□□□□□ -0.27
PMS1-221ENST00000624204 PITPNC1Q9UKF7 332 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 GAB2Q9UQC2 676 aa13.33□□□□□ -0.27
PMS1-221ENST00000624204 FAM230AA0A1W2PPH8 454 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 AMBPP02760 352 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 MYOGP15173 224 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 HLA-DRB3P79483 266 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 RUNX1Q01196 453 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 GNMTQ14749 295 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 FNDC7Q5VTL7 733 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 ARHGEF39Q8N4T4 335 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 CABLES2Q9BTV7 478 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 METTL9Q9H1A3 318 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 CCDC85CA6NKD9 419 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 ZNF850A8MQ14 1090 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 C17orf105B2RV13 164 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 H3BP45 60 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 PGA3P0DJD8 388 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 CDAP32320 146 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 CD200P41217 278 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 TFF2Q03403 129 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 GPR157Q5UAW9 335 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 C1orf189Q5VU69 101 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 C6orf201Q7Z4U5 140 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 OOSP2Q86WS3 158 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 STT3BQ8TCJ2 826 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 IL17BQ9UHF5 180 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms