RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 IGKV1D-39P04432 117 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 CD28P10747 220 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 KCNJ3P48549 501 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 FUT5Q11128 374 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 GPR176Q14439 515 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 DNLZQ5SXM8 178 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 COPS6Q7L5N1 327 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 STK40Q8N2I9 435 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 RNF182Q8N6D2 247 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 APCDD1LQ8NCL9 501 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 OR4K2Q8NGD2 314 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 ORAOV1Q8WV07 137 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 TMEM239Q8WW34 195 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 OR2M4Q96R27 311 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 VAT1Q99536 393 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 RAB22AQ9UL26 194 aa2.77□□□□□ -1.97
CPNE3-213ENST00000622183 BRD4O60885 1362 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 VGLL3A8MV65 326 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 hCG_2039718K7EN88 272 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 M0QX08 132 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 LGALS9O00182 355 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 CST4P01036 141 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 MPIP34949 423 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 VSNL1P62760 191 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 RPL10AP62906 217 aaKnown RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 CTAG1AP78358 180 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 SARNPP82979 210 aaKnown RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 STX4Q12846 297 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 LINC00303Q3SY05 128 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 SP6Q3SY56 376 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 CCDC122Q5T0U0 273 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 MIR7-3HGQ8N6C7 128 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 LINC00337Q8N6G1 96 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 CCNYL1Q8N7R7 359 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 WDR34Q96EX3 536 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 ZBED3Q96IU2 234 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 SMIM8Q96KF7 97 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 ZNF2Q9BSG1 426 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 MRPL20Q9BYC9 149 aaKnown RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 API5Q9BZZ5 524 aaKnown RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 GOLPH3Q9H4A6 298 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 SND1-IT1Q9HBX3 110 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 NLE1Q9NVX2 485 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 IL20Q9NYY1 176 aa2.76□□□□□ -1.97
CPNE3-213ENST00000622183 NXT1Q9UKK6 140 aaKnown RBP2.76□□□□□ -1.97
CPNE3-213ENST00000622183 ENSAO43768 121 aaKnown RBP2.75□□□□□ -1.97
CPNE3-213ENST00000622183 TPM3P06753 285 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 MPV17P39210 176 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 HTR2BP41595 481 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 SLC18A1P54219 525 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 SHHQ15465 462 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 MED27Q6P2C8 311 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 UGT2A3Q6UWM9 527 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 SSX6Q7RTT6 188 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 PDPNQ86YL7 162 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 TCAIMQ8N3R3 496 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 ZNF561Q8N587 486 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 DRAXINQ8NBI3 349 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-213ENST00000622183 ZNF420Q8TAQ5 688 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-213ENST00000622183 RMI2Q96E14 147 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 C8orf76Q96K31 380 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 MS4A8Q9BY19 250 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 LINC00574Q9H8X3 128 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 PLEKHA1Q9HB21 404 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 MARCOQ9UEW3 520 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-213ENST00000622183 CYB5R1Q9UHQ9 305 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 CFAP45Q9UL16 551 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 PCM1Q15154 2024 aa2.75□□□□□ -1.97
CPNE3-213ENST00000622183 DOCK8Q8NF50 2099 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 IGHV3OR16-8A0A075B7F1 116 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 LINC00854A0A1B0GVQ3 168 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 OR2AT4A6NND4 320 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 CEACAM18A8MTB9 384 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 PRAMEF26H0Y7S4 382 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 GIMD1P0DJR0 217 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 TSPAN5P62079 268 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 STX3Q13277 289 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 CEACAM16Q2WEN9 425 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 ZNF678Q5SXM1 525 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 KCTD16Q68DU8 428 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 SLC25A34Q6PIV7 304 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 IGFL1Q6UW32 110 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 FAM231DQ6ZW35 169 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 PRNTQ86SH4 94 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 NT5DC3Q86UY8 548 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 CDRT4Q8N9R6 151 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 SLC26A10Q8NG04 563 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 FAM57AQ8TBR7 257 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 KLF14Q8TD94 323 aaPredicted RBP2.74□□□□□ -1.97
CPNE3-213ENST00000622183 CCDC124Q96CT7 223 aaKnown RBP2.74□□□□□ -1.97
CPNE3-213ENST00000622183 YIPF6Q96EC8 236 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 ZNF75AQ96N20 296 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 QKIQ96PU8 341 aaKnown RBP eCLIP2.74□□□□□ -1.97
CPNE3-213ENST00000622183 IL37Q9NZH6 218 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 CHMP5Q9NZZ3 219 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 RWDD2AQ9UIY3 292 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 POFUT2Q9Y2G5 429 aa2.74□□□□□ -1.97
CPNE3-213ENST00000622183 KLF13Q9Y2Y9 288 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms