RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ECH1Q13011 328 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 D2HGDHQ8N465 521 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 AKR7LQ8NHP1 331 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 FAM213BQ8TBF2 198 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 MARS2Q96GW9 593 aaKnown RBP13.78□□□□□ -0.2
NPHP4-211ENST00000622020 ANAPC10Q9UM13 185 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 C5orf52A6NGY3 159 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 MASP2O00187 686 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 CELA2AP08217 269 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 CD27P26842 260 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 PPP1CCP36873 323 aaKnown RBP13.78□□□□□ -0.2
NPHP4-211ENST00000622020 FAM89BQ8N5H3 189 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 RTN4IP1Q8WWV3 396 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-211ENST00000622020 OR6C1Q96RD1 312 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 MOB1AQ9H8S9 216 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 LMAN1LQ9HAT1 526 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 FAM212BQ9NTI7 297 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-211ENST00000622020 CA14Q9ULX7 337 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 EIF1BO60739 113 aaKnown RBP13.77□□□□□ -0.2
NPHP4-211ENST00000622020 SNCAP37840 140 aa13.77□□□□□ -0.2
NPHP4-211ENST00000622020 EIF1P41567 113 aaKnown RBP13.77□□□□□ -0.2
NPHP4-211ENST00000622020 ZNF251Q9BRH9 671 aa13.77□□□□□ -0.2
NPHP4-211ENST00000622020 ABHD14AQ9BUJ0 271 aa13.77□□□□□ -0.2
NPHP4-211ENST00000622020 AK3Q9UIJ7 227 aa13.77□□□□□ -0.2
NPHP4-211ENST00000622020 TIMM10BQ9Y5J6 103 aa13.77□□□□□ -0.2
NPHP4-211ENST00000622020 SPINK2P20155 84 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 THBS4P35443 961 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 PIGYQ3MUY2 71 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 NKAIN1Q4KMZ8 207 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 RPUSD3Q6P087 351 aaKnown RBP13.77□□□□□ -0.21
NPHP4-211ENST00000622020 C15orf54Q8N8G6 183 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 GNRHR2Q96P88 292 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 NUDT16L1Q9BRJ7 211 aaKnown RBP13.77□□□□□ -0.21
NPHP4-211ENST00000622020 ANXA10Q9UJ72 324 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 KPTNQ9Y664 436 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 RSU1Q15404 277 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 NFAM1Q8NET5 270 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-211ENST00000622020 EDARADDQ8WWZ3 215 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 MRGPRX4Q96LA9 322 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 URGCP-MRPS24S4R325 110 aa13.77□□□□□ -0.21
NPHP4-211ENST00000622020 CDRT15L2A8MXV6 281 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 PLPP5Q8NEB5 264 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 MMP24Q9Y5R2 645 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 A0A1W2PNV4 684 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 ZNF727A8MUV8 499 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 SERPINE3A8MV23 424 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 DHRS3O75911 302 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 ZNF728P0DKX0 622 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 SULT1A1P50225 295 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 RSPO1Q2MKA7 263 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-211ENST00000622020 FBXW12Q6X9E4 464 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 ZNF565Q8N9K5 539 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 OR6X1Q8NH79 312 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 OXGR1Q96P68 337 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 MAGT1Q9H0U3 335 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 MYOTQ9UBF9 498 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 KCNIP3Q9Y2W7 256 aa13.76□□□□□ -0.21
NPHP4-211ENST00000622020 CRYM-AS1A6NIL9 109 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 GEMIN2O14893 280 aaKnown RBP13.75□□□□□ -0.21
NPHP4-211ENST00000622020 PIAS2O75928 621 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 ONECUT2O95948 504 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 PTGDSP41222 190 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 CSNK1A1P48729 337 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 SLC22A25Q6T423 547 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 OPN5Q6U736 354 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 SLC25A45Q8N413 288 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 UCK1Q9HA47 277 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 KCNJ16Q9NPI9 418 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 C19orf12Q9NSK7 152 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 M0R135 149 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 PHF1O43189 567 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-211ENST00000622020 TNFSF12O43508 249 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 MT-ND4LP03901 98 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 FBP1P09467 338 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 RAB5AP20339 215 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 C17orf82Q86X59 251 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-211ENST00000622020 WDSUB1Q8N9V3 476 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 ZNF799Q96GE5 643 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
NPHP4-211ENST00000622020 CCDC187A0A096LP49 1063 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 C10orf142B7Z368 130 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 JMJD7P0C870 316 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 GRB2P62993 217 aaKnown RBP13.74□□□□□ -0.21
NPHP4-211ENST00000622020 CCL20P78556 96 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 ZNF561Q8N587 486 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 ZFP62Q8NB50 900 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-211ENST00000622020 SSC4DQ8WTU2 575 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 HAS2Q92819 552 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 ZDHHC8Q9ULC8 765 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 FOXI3A8MTJ6 420 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-211ENST00000622020 YIF1AO95070 293 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 PRF1P14222 555 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 MSR1P21757 451 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 GLP1RP43220 463 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 ACER2Q5QJU3 275 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 RAET1LQ5VY80 246 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 RHBDD1Q8TEB9 315 aa13.74□□□□□ -0.21
NPHP4-211ENST00000622020 LUZP4Q9P127 313 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms