RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CSTBP04080 98 aaKnown RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 FCGR3AP08637 254 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 GDF1P27539 372 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 PMELP40967 661 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 FUT6P51993 359 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 ZNF92Q03936 586 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 RAB11FIP2Q7L804 512 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 BAP18Q8IXM2 172 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 BHLHE23Q8NDY6 225 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 BORCS8Q96FH0 119 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 ZNF2Q9BSG1 426 aaPredicted RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 LIME1Q9H400 295 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 SMOC1Q9H4F8 434 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 ZNF703Q9H7S9 590 aaPredicted RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 MSGN1A6NI15 193 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 C9orf172C9J069 976 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 XRCC2O43543 280 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 PATE4P0C8F1 98 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 CD79AP11912 226 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 EDN3P14138 238 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 PDZK1IP1Q13113 114 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 NKAPLQ5M9Q1 402 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 UNQ6126/PRO20091Q6UXV3 157 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 TMEM105Q8N8V8 129 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 SPERTQ8NA61 448 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 Q8NFD4 153 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 OR10AD1Q8NGE0 317 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 LHFPL5Q8TAF8 219 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 ZNF845Q96IR2 970 aaPredicted RBP8.17□□□□□ -1.1
PDPN-212ENST00000621990 FAM173AQ9BQD7 235 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 FAAP24Q9BTP7 215 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 C1orf123Q9NWV4 160 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 TAS2R3Q9NYW6 316 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 TUBD1Q9UJT1 453 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 TECTAO75443 2155 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 RPL36A-HNRNPH2H7BZ11 118 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 OR5H8P0DN80 308 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 LHX2P50458 406 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 RBM39Q14498 530 aaKnown RBP8.17□□□□□ -1.1
PDPN-212ENST00000621990 DAZAP2Q15038 168 aaPredicted RBP8.17□□□□□ -1.1
PDPN-212ENST00000621990 TAF9Q16594 264 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 PDSS1Q5T2R2 415 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 ELP2Q6IA86 826 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 OSR2Q8N2R0 312 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 ZBTB44Q8NCP5 570 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 SULT4A1Q9BR01 284 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 SLC5A7Q9GZV3 580 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 METTL8Q9H825 291 aaKnown RBP8.17□□□□□ -1.1
PDPN-212ENST00000621990 NECAP2Q9NVZ3 263 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 COQ3Q9NZJ6 369 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 ZNF581Q9P0T4 197 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 LRFN1Q9P244 771 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 PCDHB10Q9UN67 800 aa8.17□□□□□ -1.1
PDPN-212ENST00000621990 ZNF816-ZNF321PA0A0X1KG74 233 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 FAM157CP0CG43 387 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 BTN1A1Q13410 526 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 RAB32Q13637 225 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 SPINK14Q6IE38 97 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 TCEAL6Q6IPX3 200 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 CCDC36Q8IYA8 594 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 CPEB3Q8NE35 698 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 OR2M7Q8NG81 312 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 TCEAL3Q969E4 200 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 MARC2Q969Z3 335 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 THOC3Q96J01 351 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 GPR87Q9BY21 358 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 MS4A7Q9GZW8 240 aaPredicted RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 BCO1Q9HAY6 547 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 MEMO1Q9Y316 297 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 C21orf140B9A014 251 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 GEMIN2O14893 280 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 FARS2O95363 451 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 KNG1P01042 644 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 MPLP40238 635 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 CLDN18P56856 261 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 ZNF273Q14593 569 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 PIGYQ3MUY2 71 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 PABPC1L2AQ5JQF8 200 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 TSPO2Q5TGU0 170 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 CDCP2Q5VXM1 449 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 SGPP2Q8IWX5 399 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 BPIFCQ8NFQ6 507 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 OR51F2Q8NH61 342 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 RNF141Q8WVD5 230 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 GALNT14Q96FL9 552 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 CMSS1Q9BQ75 279 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 SLC7A11Q9UPY5 501 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 A0A1W2PNU3 283 aaPredicted RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 TAAR5O14804 337 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 SFTPBP07988 381 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 RBMXP38159 391 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 RBM11P57052 281 aaKnown RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 FBXL14Q8N1E6 418 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 LRTM2Q8N967 370 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.16□□□□□ -1.1
PDPN-212ENST00000621990 OR1S2Q8NGQ3 325 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 CNTNAP3BQ96NU0 1288 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 CNTNAP3Q9BZ76 1288 aa8.16□□□□□ -1.1
PDPN-212ENST00000621990 RNF122Q9H9V4 155 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms