RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CLDN24A6NM45 220 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SYCE1LA8MT33 242 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR11H12B2RN74 326 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 M0R1B8 84 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SULT2B1O00204 365 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 NME4O00746 187 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 UBDO15205 165 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 MGRN1O60291 552 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 FAM189A1O60320 539 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 FKBP6O75344 327 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SUPT3HO75486 399 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 CNIH1O95406 144 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 HPRT1P00492 218 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 PSG2P11465 335 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 ADORA1P30542 326 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SHMT2P34897 504 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 IFNGR2P38484 337 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 CEACAM6P40199 344 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 PMELP40967 661 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 TTPAP49638 278 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 ERFP50548 548 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 FABP6P51161 128 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 DLX1P56177 255 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 AP1S2P56377 157 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 RAB25P57735 213 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF121P58317 390 aaPredicted RBP2.67□□□□□ -1.98
BRCA1-229ENST00000621897 PPP1CBP62140 327 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 RPL32P62910 135 aaKnown RBP2.67□□□□□ -1.98
BRCA1-229ENST00000621897 ECH1Q13011 328 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 APOFQ13790 326 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 HIST3H3Q16695 136 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SLC25A35Q3KQZ1 300 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 TPTE2P1Q5T6R2 138 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 CST9Q5W186 159 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 CYHR1Q6ZMK1 362 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 PRSS41Q7RTY9 318 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 DHFR2Q86XF0 187 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 CBLN2Q8IUK8 224 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SKA3Q8IX90 412 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 PNKDQ8N490 385 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 CLDN22Q8N7P3 220 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF557Q8N988 423 aaPredicted RBP2.67□□□□□ -1.98
BRCA1-229ENST00000621897 HSD17B11Q8NBQ5 300 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM161BQ8NDZ6 487 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR11H1Q8NG94 326 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR4K17Q8NGC6 315 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR52E4Q8NGH9 312 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR11H2Q8NH07 326 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR10A6Q8NH74 314 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 COQ8AQ8NI60 647 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SRSF12Q8WXF0 261 aaKnown RBP2.67□□□□□ -1.98
BRCA1-229ENST00000621897 IL22RA2Q969J5 263 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 EEF1AKMT3Q96AZ1 226 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 FGGYQ96C11 551 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 IMP4Q96G21 291 aaKnown RBP2.67□□□□□ -1.98
BRCA1-229ENST00000621897 TMEM80Q96HE8 168 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 PHB2Q99623 299 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 AIF1LQ9BQI0 150 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OSBPL11Q9BXB4 747 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 TPK1Q9H3S4 243 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 MAP1LC3AQ9H492 121 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 C11orf49Q9H6J7 331 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF442Q9H7R0 627 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 ARMC1Q9NVT9 282 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR52A1Q9UKL2 312 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SLC7A11Q9UPY5 501 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 OR51B2Q9Y5P1 312 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 SNX10Q9Y5X0 201 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 NUBP2Q9Y5Y2 271 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 USP6P35125 1406 aa2.67□□□□□ -1.98
BRCA1-229ENST00000621897 A0A1W2PP64 1363 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 RFX7Q2KHR2 1363 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 IGLV3-22A0A075B6J6 115 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 IGHV2OR16-5A0A0B4J2B6 119 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 LOC100131303A0A0U1RQF7 123 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 CENPVL3A0A0U1RRI6 287 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 A0A1W2PQ67 120 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 FAM166BA8MTA8 275 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 F5H5K5 113 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 TSTD3H0UI37 97 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 TNFRSF11BO00300 401 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 PHYHO14832 338 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 BET1O15155 118 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 RAD51CO43502 376 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 MED6O75586 246 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 EIF3GO75821 320 aaKnown RBP eCLIP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 SEMG1P04279 462 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 ARG1P05089 322 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 PCCAP05165 728 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 ICAM2P13598 275 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 MYL12AP19105 171 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 WARSP23381 471 aaKnown RBP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 F2RP25116 425 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 GPX4P36969 197 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 GLP1RP43220 463 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 BTDP43251 543 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 RPL5P46777 297 aaKnown RBP2.66□□□□□ -1.98
BRCA1-229ENST00000621897 RAB7AP51149 207 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 UBE2E1P51965 193 aa2.66□□□□□ -1.98
BRCA1-229ENST00000621897 RAB38P57729 211 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms