RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 YPEL1O60688 119 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 DEDDO75618 318 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 UPK3AO75631 287 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 NGFRP08138 427 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 ALDH3B1P43353 468 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 ARF6P62330 175 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 CST6Q15828 149 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 TAF9Q16594 264 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 OCIAD2Q56VL3 154 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 SPSB3Q6PJ21 355 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 ZNF66Q6ZN08 573 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 CMTM1Q8IZ96 169 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 STPG4Q8N801 248 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 ZNF738Q8NE65 137 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 MARCH1Q8TCQ1 289 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 GPR119Q8TDV5 335 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 YPEL2Q96QA6 119 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 TPSD1Q9BZJ3 242 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 TBL1XR1Q9BZK7 514 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 ZNF430Q9H8G1 570 aaPredicted RBP9.14□□□□□ -0.95
VPS11-207ENST00000620429 FLRT3Q9NZU0 649 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 PRUNE2Q8WUY3 3088 aa9.14□□□□□ -0.95
VPS11-207ENST00000620429 H3BSH0 61 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 M0QZ24 198 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 SMPD2O60906 423 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 NDUFB2O95178 105 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 MDKP21741 143 aaPredicted RBP9.13□□□□□ -0.95
VPS11-207ENST00000620429 UCP3P55916 312 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 IL24Q13007 206 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 FHL1Q13642 323 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 PRSS8Q16651 343 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 ACOT6Q3I5F7 207 aaPredicted RBP9.13□□□□□ -0.95
VPS11-207ENST00000620429 TMEM184AQ6ZMB5 413 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 TMEM156Q8N614 296 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 EXD3Q8N9H8 876 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 OR4C5Q8NGB2 326 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 THAP3Q8WTV1 239 aaPredicted RBP9.13□□□□□ -0.95
VPS11-207ENST00000620429 ERGIC1Q969X5 290 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 CIB3Q96Q77 187 aaPredicted RBP9.13□□□□□ -0.95
VPS11-207ENST00000620429 OR8B4Q96RC9 309 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 GPR132Q9UNW8 380 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 RNF115Q9Y4L5 304 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 COX11Q9Y6N1 276 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 TICRRQ7Z2Z1 1910 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 A0A0B4J2E0 115 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 A0A1B0GX12 115 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 CDC14CA4D256 554 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 PRR32B1ATL7 298 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 SYNGR4O95473 234 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 CCL20P78556 96 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 ANKRD55Q3KP44 614 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 RTL6Q6ICC9 239 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 FBXO42Q6P3S6 717 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 PRSS57Q6UWY2 283 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 MYPOPQ86VE0 399 aaPredicted RBP9.13□□□□□ -0.95
VPS11-207ENST00000620429 NPEPL1Q8NDH3 523 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 FAM213BQ8TBF2 198 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 TOMM40LQ969M1 308 aa9.13□□□□□ -0.95
VPS11-207ENST00000620429 ELL3Q9HB65 397 aaPredicted RBP9.13□□□□□ -0.95
VPS11-207ENST00000620429 PROB1E7EW31 1015 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 NUDT21O43809 227 aaKnown RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 MMP23AO75900 390 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 CMPK1P30085 196 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 CDC34P49427 236 aaPredicted RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 SUPT4H1P63272 117 aaKnown RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 PLAURQ03405 335 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 SLC9A3R2Q15599 337 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 FBLN7Q53RD9 439 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 FAM220AQ7Z4H9 259 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 YAF2Q8IY57 180 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 D2HGDHQ8N465 521 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 OR2M7Q8NG81 312 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 ZPLD1Q8TCW7 415 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 RPUSD4Q96CM3 377 aaKnown RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 MS4A10Q96PG2 267 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 RAB11FIP5Q9BXF6 653 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 C5orf66Q9H5L9 145 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 C19orf53Q9UNZ5 99 aaPredicted RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 TRAV30A0A087WSZ9 112 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 SCDO00767 359 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 PIAS2O75928 621 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 CPMP14384 443 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 FPR2P25090 351 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 HSD11B1P28845 292 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 PEBP1P30086 187 aaKnown RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 GABRA3P34903 492 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 HRH1P35367 487 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 CEBPGP53567 150 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 FAM3BP58499 235 aaPredicted RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 FZD2Q14332 565 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 DEFB134Q4QY38 66 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 ZAR1Q86SH2 424 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 CATSPERDQ86XM0 798 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 PTX4Q96A99 478 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 SDSLQ96GA7 329 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 SGCZQ96LD1 299 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 ZNF552Q9H707 407 aaPredicted RBP9.12□□□□□ -0.95
VPS11-207ENST00000620429 ZNF319Q9P2F9 582 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 IL19Q9UHD0 177 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 TUBD1Q9UJT1 453 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms