RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 GLI4P10075 376 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 CDCP2Q5VXM1 449 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 NSUN5P2Q63ZY6 315 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 CLEC9AQ6UXN8 241 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 LDLRAD3Q86YD5 345 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 C10orf35Q96D05 121 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 TLNRD1Q9H1K6 362 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 PINLYPA6NC86 204 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 LRRC3CA6NJW4 275 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 RRP8O43159 456 aaKnown RBP16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 LRP3O75074 770 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 CA11O75493 328 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 APOC1P02654 83 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 RBMXP38159 391 aaKnown RBP16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 HTR5AP47898 357 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 SURF2Q15527 256 aaPredicted RBP16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 TSPO2Q5TGU0 170 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 PPP1R32Q7Z5V6 425 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 TOMM40LQ969M1 308 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 CNTNAP3BQ96NU0 1288 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 CNTNAP3Q9BZ76 1288 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 HRH4Q9H3N8 390 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 PADI1Q9ULC6 663 aa16.72■□□□□ 0.27
PCDHGB3-202ENST00000618934 OR6C6A6NF89 314 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 IGHV3-9P01782 118 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 CST2P09228 141 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 TDGF1P13385 188 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 ZNF92Q03936 586 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 GGNBP1Q5YKI7 109 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 SLC23A3Q6PIS1 610 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 Q6ZPA2 131 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 AAED1Q7RTV5 226 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 ZNF845Q96IR2 970 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 SF3B5Q9BWJ5 86 aaKnown RBP16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 WNT5BQ9H1J7 359 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 C1orf123Q9NWV4 160 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 LPAR3Q9UBY5 353 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 CRYM-AS1A6NIL9 109 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 ZNF587BE7ETH6 402 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 TRAPPC6AO75865 159 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 CHATP28329 748 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 SRD5A2P31213 254 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 CEACAM16Q2WEN9 425 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 CLRN3Q8NCR9 226 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 OR10AD1Q8NGE0 317 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 OR10D3Q8NH80 312 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 ADAMTS17Q8TE56 1095 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 ARL11Q969Q4 196 aa16.71■□□□□ 0.27
PCDHGB3-202ENST00000618934 NRASP01111 189 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 P04436 131 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 CTSDP07339 412 aaPredicted RBP16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 FCGR3AP08637 254 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 LPAR6P43657 344 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 ID4P47928 161 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 PABPC1L2AQ5JQF8 200 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 SKA3Q8IX90 412 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 ABHD3Q8WU67 409 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 SPSB1Q96BD6 273 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 BSCL2Q96G97 398 aaPredicted RBP16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 CMSS1Q9BQ75 279 aaKnown RBP16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 DECR2Q9NUI1 292 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 DNAJB11Q9UBS4 358 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 ZNF629Q9UEG4 869 aaPredicted RBP16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 AHCTF1Q8WYP5 2266 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 ZNF850A8MQ14 1090 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 TERTO14746 1132 aaKnown RBP16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 NDUFA2O43678 99 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 PIGPP57054 158 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 PPA1Q15181 289 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 KRTAP27-1Q3LI81 207 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 C5orf24Q7Z6I8 188 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 SGPP2Q8IWX5 399 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 FBXL14Q8N1E6 418 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 ADGRG7Q96K78 797 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 SMIM3Q9BZL3 60 aa16.7■□□□□ 0.26
PCDHGB3-202ENST00000618934 F8W036 122 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 FBXO24O75426 580 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 NME2P22392 152 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 RBP2P50120 134 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 FXYD4P59646 89 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 BLOC1S1P78537 153 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 FAM3AP98173 230 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 WDR5BQ86VZ2 330 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 CBLN2Q8IUK8 224 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 CPT1CQ8TCG5 803 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 BORCS8Q96FH0 119 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 FOXB1Q99853 325 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 TREM1Q9NP99 234 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 MMP26Q9NRE1 261 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 PCDHB16Q9NRJ7 776 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 LSM5Q9Y4Y9 91 aaKnown RBP16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 CCDC163A0A0D9SF12 145 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 GJE1A6NN92 205 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 RPL12P30050 165 aaKnown RBP16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 DAZAP2Q15038 168 aaPredicted RBP16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 ARL6IP1Q15041 203 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 TMEM42Q69YG0 159 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 FNDC9Q8TBE3 224 aa16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 CPNE2Q96FN4 548 aaPredicted RBP16.69■□□□□ 0.26
PCDHGB3-202ENST00000618934 SGCZQ96LD1 299 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms