RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 BOLLQ8N9W6 283 aaKnown RBP6.83□□□□□ -1.32
NEK3-209ENST00000618856 OR5AK2Q8NH90 309 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 NANPQ8TBE9 248 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 PGLYRP3Q96LB9 341 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 CCL13Q99616 98 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 PDCD1LG2Q9BQ51 273 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 NUDT16L1Q9BRJ7 211 aaKnown RBP6.83□□□□□ -1.32
NEK3-209ENST00000618856 CDCA4Q9BXL8 241 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 RASSF4Q9H2L5 321 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 VCX3BQ9H321 246 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 PLEKHA1Q9HB21 404 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 PAK1IP1Q9NWT1 392 aaPredicted RBP6.83□□□□□ -1.32
NEK3-209ENST00000618856 MTCH1Q9NZJ7 389 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 SLC7A11Q9UPY5 501 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 POLDIP2Q9Y2S7 368 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 LSM2Q9Y333 95 aaKnown RBP6.83□□□□□ -1.32
NEK3-209ENST00000618856 MAB21L2Q9Y586 359 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 AUP1Q9Y679 476 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 A0A0A6YYJ9 748 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 TRBV5-5A0A0J9YX44 114 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 FAM230AA0A1W2PPH8 454 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 ZNF879B4DU55 563 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 F8VVB4 439 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 F8VWA3 439 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 H3BSH0 61 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 SLC1A7O00341 560 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 ENSAO43768 121 aaKnown RBP6.82□□□□□ -1.32
NEK3-209ENST00000618856 KNG1P01042 644 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 CDK1P06493 297 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 MYL12AP19105 171 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 PRKACBP22694 351 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 AZGP1P25311 298 aaKnown RBP6.82□□□□□ -1.32
NEK3-209ENST00000618856 ZP1P60852 638 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 IL13RA1P78552 427 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 BDH1Q02338 343 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 BTNL3Q6UXE8 466 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 C1orf122Q6ZSJ8 110 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 LHFPL2Q6ZUX7 228 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 USP43Q70EL4 1123 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 BTN2A1Q7KYR7 527 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 RNF144BQ7Z419 303 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 SERPINA12Q8IW75 414 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 FGFRL1Q8N441 504 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 CD177Q8N6Q3 437 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 Q8NFD4 153 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 BPIFB6Q8NFQ5 453 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 GATAD2BQ8WXI9 593 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 TMIGD2Q96BF3 282 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 BORCS8Q96FH0 119 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 MED30Q96HR3 178 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 ZNF488Q96MN9 340 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 OPALINQ96PE5 141 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 DCTN5Q9BTE1 182 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 COMMD4Q9H0A8 199 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 SIRPDQ9H106 197 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 PRDM13Q9H4Q3 707 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 ZCCHC4Q9H5U6 513 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 RHOFQ9HBH0 211 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 SNTG1Q9NSN8 517 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 RPUSD1Q9UJJ7 312 aaKnown RBP6.82□□□□□ -1.32
NEK3-209ENST00000618856 ZNF281Q9Y2X9 895 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 PCDHGB5Q9Y5G0 923 aa6.82□□□□□ -1.32
NEK3-209ENST00000618856 WNK2Q9Y3S1 2297 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 STAB1Q9NY15 2570 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 IGKV1-12A0A0C4DH73 117 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 H0YHG0 523 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 SULT1B1O43704 296 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 ZNF737O75373 536 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 KDM4BO94953 1096 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 IGKV1D-12P01611 117 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 ALDOBP05062 364 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 SELLP14151 372 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 ZNF20P17024 532 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 IGFBP3P17936 291 aaPredicted RBP6.81□□□□□ -1.32
NEK3-209ENST00000618856 PRDX2P32119 198 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 SRP14P37108 136 aaKnown RBP6.81□□□□□ -1.32
NEK3-209ENST00000618856 HSPA13P48723 471 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 ATP1B3P54709 279 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 WNT4P56705 351 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 PDZK1IP1Q13113 114 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 SCGB2A2Q13296 93 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 MED21Q13503 144 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 ZNF146Q15072 292 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 SMIM21Q3B7S5 101 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 YIF1BQ5BJH7 314 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 IZUMO2Q6UXV1 221 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 ASCL4Q6XD76 172 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 AHSA2Q719I0 299 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 LYPD6Q86Y78 171 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 Q8IYB0 196 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 SAXO1Q8IYX7 474 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 ZNF561Q8N587 486 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 KIR3DL3Q8N743 410 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 PNLDC1Q8NA58 520 aaKnown RBP6.81□□□□□ -1.32
NEK3-209ENST00000618856 ZSCAN4Q8NAM6 433 aaPredicted RBP6.81□□□□□ -1.32
NEK3-209ENST00000618856 OR5T2Q8NGG2 359 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 OR5D14Q8NGL3 314 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 OR13C3Q8NGS6 347 aa6.81□□□□□ -1.32
NEK3-209ENST00000618856 TRMT10AQ8TBZ6 339 aaKnown RBP6.81□□□□□ -1.32
NEK3-209ENST00000618856 GPR148Q8TDV2 347 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms