RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 TMPRSS13Q9BYE2 586 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 TREM2Q9NZC2 230 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 MPC1Q9Y5U8 109 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 SULT1A3P0DMM9 295 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 SULT1A4P0DMN0 295 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 KDF1Q8NAX2 398 aaPredicted RBP16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 MRGPRDQ8TDS7 321 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 HES4Q9HCC6 221 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 CACFD1Q9UGQ2 172 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 MRM2Q9UI43 246 aaKnown RBP16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 ZNF835Q9Y2P0 537 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 MASP2O00187 686 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 AGFG2O95081 481 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 BAP18Q8IXM2 172 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 CNTD2Q9H8S5 307 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 OR5V1Q9UGF6 321 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 HRASP01112 189 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 WNT1P04628 370 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 LIFP15018 202 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 CRYBB2P43320 205 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 NPEPL1Q8NDH3 523 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 OR2M3Q8NG83 312 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 ZNF331Q9NQX6 463 aaPredicted RBP16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 TINAGQ9UJW2 476 aa16.4■□□□□ 0.22
AC008878.3-201ENST00000617428 CYC1P08574 325 aa16.39■□□□□ 0.22
AC008878.3-201ENST00000617428 OR3A1P47881 315 aa16.39■□□□□ 0.22
AC008878.3-201ENST00000617428 Q3ZCU0 254 aa16.39■□□□□ 0.22
AC008878.3-201ENST00000617428 RPUSD4Q96CM3 377 aaKnown RBP16.39■□□□□ 0.22
AC008878.3-201ENST00000617428 H7BYZ3 331 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 AQP8O94778 261 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 RPS2P15880 293 aaKnown RBP16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 MLF1P58340 268 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 LSM6P62312 80 aaKnown RBP16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 SSX1Q16384 188 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 RELL2Q8NC24 303 aaPredicted RBP16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 CXXC4Q9H2H0 198 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 LAMB2P55268 1798 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 GREM1O60565 184 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 ZNF205O95201 554 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 PDGFAP04085 211 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 FCARP24071 287 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 SRP14P37108 136 aaKnown RBP16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 HIST2H3AQ71DI3 136 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 OR2T6Q8NHC8 308 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 TXN2Q99757 166 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 NTMQ9P121 344 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 ZNF727A8MUV8 499 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 GP1BAP07359 652 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 STARD6P59095 220 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 NDFIP1Q9BT67 221 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 GAL3ST2Q9H3Q3 398 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 AKIP1Q9NQ31 210 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 SLC17A5Q9NRA2 495 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 AMDHD2Q9Y303 409 aa16.39■□□□□ 0.21
AC008878.3-201ENST00000617428 TUBAL3A6NHL2 446 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 MPGP29372 298 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 PXDC1Q5TGL8 231 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 C10orf111Q8N326 155 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 OR6S1Q8NH40 331 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 HGDQ93099 445 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 LOXL4Q96JB6 756 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 H0Y8G0 127 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 CCL21O00585 134 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 CDX4O14627 284 aaPredicted RBP16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 TMPRSS2O15393 492 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 COX7A2P2O60397 106 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 CALCRP30988 508 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 CD96P40200 585 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 UCNP55089 124 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 XAF1Q6GPH4 301 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 OR5D13Q8NGL4 314 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 OR10AC1Q8NH08 325 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 RCL1Q9Y2P8 373 aaKnown RBP16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 SCGB1D1O95968 90 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 HNF1AP20823 631 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 HIKESHIQ53FT3 197 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 ADAM5Q6NVV9 412 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 CCDC190Q86UF4 302 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 TMEM56Q96MV1 263 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 IL36GQ9NZH8 169 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 NKX2-8O15522 239 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 MBP02144 154 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 MITD1Q8WV92 249 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 PTP4A1Q93096 173 aa16.38■□□□□ 0.21
AC008878.3-201ENST00000617428 INTS1Q8N201 2190 aaKnown RBP16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 TRBV5-3A0A0A0MS03 114 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 CDIPTO14735 213 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 SLC25A4P12235 298 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 FOXO1Q12778 655 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 TGIF1Q15583 401 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 ZNF721Q8TF20 911 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 SLIRPQ9GZT3 109 aaKnown RBP16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 SPTBP11277 2137 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 ZNF787Q6DD87 383 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 KPTNQ9Y664 436 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 CTAG2O75638 210 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 CELA2AP08217 269 aa16.37■□□□□ 0.21
AC008878.3-201ENST00000617428 KCNJ3P48549 501 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms