RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TRAV20A0A0B4J274 112 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 IGKV1-9A0A0C4DH69 117 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 IGHV1-69-2A0A0G2JMI3 117 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 PQLC2LA1A4F0 135 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 LRRC30A6NM36 301 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 TRIM77I1YAP6 450 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 PPIHO43447 177 aaKnown RBP12.47□□□□□ -0.41
UBXN1-218ENST00000616865 CDC14BO60729 498 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 ALX3O95076 343 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 CYB5AP00167 134 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 IGFBP3P17936 291 aaPredicted RBP12.47□□□□□ -0.41
UBXN1-218ENST00000616865 EPHA1P21709 976 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 FGF9P31371 208 aaPredicted RBP12.47□□□□□ -0.41
UBXN1-218ENST00000616865 LMO4P61968 165 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 LSM3P62310 102 aaKnown RBP12.47□□□□□ -0.41
UBXN1-218ENST00000616865 MAB21L1Q13394 359 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 CLVS1Q8IUQ0 354 aaPredicted RBP12.47□□□□□ -0.41
UBXN1-218ENST00000616865 JAGN1Q8N5M9 183 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 TEX29Q8N6K0 151 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 C3orf56Q8N813 242 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 PNLDC1Q8NA58 520 aaKnown RBP12.47□□□□□ -0.41
UBXN1-218ENST00000616865 OR51A2Q8NGJ7 313 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 GCDHQ92947 438 aaPredicted RBP12.47□□□□□ -0.41
UBXN1-218ENST00000616865 C1orf123Q9NWV4 160 aa12.47□□□□□ -0.41
UBXN1-218ENST00000616865 CCDC160A6NGH7 325 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 IFNL4K9M1U5 179 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 PLATP00750 562 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 ALDOBP05062 364 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 EGR1P18146 543 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 HAAOP46952 286 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 POU3F4P49335 361 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 HFEQ30201 348 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 GLT8D1Q68CQ7 371 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 FAHD2BQ6P2I3 314 aaPredicted RBP12.46□□□□□ -0.41
UBXN1-218ENST00000616865 HAGHLQ6PII5 290 aaPredicted RBP12.46□□□□□ -0.41
UBXN1-218ENST00000616865 C1orf229Q6ZS94 237 aaPredicted RBP12.46□□□□□ -0.41
UBXN1-218ENST00000616865 PEG10Q86TG7 708 aaKnown RBP12.46□□□□□ -0.41
UBXN1-218ENST00000616865 ANKRD13BQ86YJ7 626 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 NKAIN3Q8N8D7 197 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 SGMS2Q8NHU3 365 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 CCL17Q92583 94 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 RPL3LQ92901 407 aaKnown RBP12.46□□□□□ -0.41
UBXN1-218ENST00000616865 ERGIC1Q969X5 290 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 RFT1Q96AA3 541 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 FAHD2AQ96GK7 314 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 SPACA5Q96QH8 159 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 S100A13Q99584 98 aa12.46□□□□□ -0.41
UBXN1-218ENST00000616865 PPIL3Q9H2H8 161 aaKnown RBP12.46□□□□□ -0.41
UBXN1-218ENST00000616865 LOC105371242A0A075B767 164 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 TRAV1-2A0A0B4J238 106 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 J3QT63 122 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 TMEM225BP0DP42 221 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 ZNF93P35789 620 aaPredicted RBP12.45□□□□□ -0.42
UBXN1-218ENST00000616865 PSMD7P51665 324 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 ZNF154Q13106 437 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 KISS1Q15726 138 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 MPPED2Q15777 294 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 ZNF529Q6P280 563 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 ANGPTL5Q86XS5 388 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 MKXQ8IYA7 352 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 C1orf87Q8N0U7 546 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 BOLLQ8N9W6 283 aaKnown RBP12.45□□□□□ -0.42
UBXN1-218ENST00000616865 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 OR52N4Q8NGI2 321 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 ZNF671Q8TAW3 534 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 FOXRED1Q96CU9 486 aaPredicted RBP12.45□□□□□ -0.42
UBXN1-218ENST00000616865 JMJD8Q96S16 334 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 CENPOQ9BU64 300 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 FAM192AQ9GZU8 254 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 FGF23Q9GZV9 251 aaPredicted RBP12.45□□□□□ -0.42
UBXN1-218ENST00000616865 OR51I2Q9H344 312 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 GCM1Q9NP62 436 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 POLDIP2Q9Y2S7 368 aa12.45□□□□□ -0.42
UBXN1-218ENST00000616865 CDIPTO14735 213 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 AVPP01185 164 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 RAB3BP20337 219 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 RANBP1P43487 201 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 GATA4P43694 442 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 BLMHQ13867 455 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 SPRNQ5BIV9 151 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 ASPHD2Q6ICH7 369 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 C1QL2Q7Z5L3 287 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 WDR86Q86TI4 376 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 OR5D18Q8NGL1 313 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 ZNF420Q8TAQ5 688 aaPredicted RBP12.44□□□□□ -0.42
UBXN1-218ENST00000616865 ZNF665Q9H7R5 613 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 ELL3Q9HB65 397 aaPredicted RBP12.44□□□□□ -0.42
UBXN1-218ENST00000616865 PLGRKTQ9HBL7 147 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 RNF7Q9UBF6 113 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 AK6Q9Y3D8 172 aaKnown RBP12.44□□□□□ -0.42
UBXN1-218ENST00000616865 MEGF8Q7Z7M0 2845 aa12.44□□□□□ -0.42
UBXN1-218ENST00000616865 IGKV1-27A0A075B6S5 117 aa12.43□□□□□ -0.42
UBXN1-218ENST00000616865 A0A0G2JMP0 313 aa12.43□□□□□ -0.42
UBXN1-218ENST00000616865 A0A0X1KG70 313 aa12.43□□□□□ -0.42
UBXN1-218ENST00000616865 TRAPPC2LH3BP13 241 aa12.43□□□□□ -0.42
UBXN1-218ENST00000616865 CDRT1O95170 752 aa12.43□□□□□ -0.42
UBXN1-218ENST00000616865 PTBP3O95758 552 aaKnown RBP12.43□□□□□ -0.42
UBXN1-218ENST00000616865 MTNR1BP49286 362 aa12.43□□□□□ -0.42
UBXN1-218ENST00000616865 MXD1Q05195 221 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms