RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 SLC25A26Q70HW3 274 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 CROCCP3Q8IVE0 287 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 DTX3Q8N9I9 347 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 FOXRED1Q96CU9 486 aaPredicted RBP6.78□□□□□ -1.32
PCDH9-205ENST00000614931 KCTD12Q96CX2 325 aaKnown RBP6.78□□□□□ -1.32
PCDH9-205ENST00000614931 PERPQ96FX8 193 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 COX4I2Q96KJ9 171 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 Q96MF0 132 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 HIST1H2AAQ96QV6 131 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 SMR3AQ99954 134 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 PKIBQ9C010 78 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 C6orf62Q9GZU0 229 aaPredicted RBP6.78□□□□□ -1.32
PCDH9-205ENST00000614931 SLC22A4Q9H015 551 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 BANF2Q9H503 90 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 DYNLRB1Q9NP97 96 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 CBLN4Q9NTU7 201 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 MTCH1Q9NZJ7 389 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 ABRACLQ9P1F3 81 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 IL36RNQ9UBH0 155 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 SPATA2Q9UM82 520 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 ING4Q9UNL4 249 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 NOP16Q9Y3C1 178 aaKnown RBP6.78□□□□□ -1.32
PCDH9-205ENST00000614931 CACNG2Q9Y698 323 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 A3GALT2U3KPV4 340 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 DSCAML1Q8TD84 2053 aa6.78□□□□□ -1.32
PCDH9-205ENST00000614931 A6NLC8 198 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 TMEM210A6NLX4 147 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 WNT9BO14905 357 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 HPXP02790 462 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 PGA5P0DJD9 388 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 TMEM225BP0DP42 221 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 BMP4P12644 408 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 ARSBP15848 533 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 ELK1P19419 428 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 SERPINA2P20848 420 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 PPOXP50336 477 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 CCL8P80075 99 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 IL24Q13007 206 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 DYNC1I2Q13409 638 aaKnown RBP6.77□□□□□ -1.33
PCDH9-205ENST00000614931 LSAMPQ13449 338 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 MOGQ16653 247 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 MOGAT2Q3SYC2 334 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 SLC22A6Q4U2R8 563 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 WDR82Q6UXN9 313 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 CMTM4Q8IZR5 234 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 CIARTQ8N365 385 aaPredicted RBP6.77□□□□□ -1.33
PCDH9-205ENST00000614931 MFSD4AQ8N468 514 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 SAMD12Q8N8I0 201 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 PNLDC1Q8NA58 520 aaKnown RBP6.77□□□□□ -1.33
PCDH9-205ENST00000614931 SPERTQ8NA61 448 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 PXT1Q8NFP0 134 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 ZNF671Q8TAW3 534 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 ACOT12Q8WYK0 555 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 FAM46BQ96A09 425 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 SEH1LQ96EE3 360 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 WDFY2Q96P53 400 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 GAL3ST1Q99999 423 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 NICN1Q9BSH3 213 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 LPAR5Q9H1C0 372 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 MMP27Q9H306 513 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 CXorf56Q9H5V9 222 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 NEK6Q9HC98 313 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 CYSLTR2Q9NS75 346 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 RBFOX1Q9NWB1 397 aaKnown RBP6.77□□□□□ -1.33
PCDH9-205ENST00000614931 C14orf119Q9NWQ9 140 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 C1orf123Q9NWV4 160 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 RHBDL2Q9NX52 303 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 TREM2Q9NZC2 230 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 ZDHHC8Q9ULC8 765 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 LAMP3Q9UQV4 416 aa6.77□□□□□ -1.33
PCDH9-205ENST00000614931 MAP1AP78559 2803 aaPredicted RBP6.77□□□□□ -1.33
PCDH9-205ENST00000614931 VSTM5A8MXK1 200 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 LYNX1G3V0Z9 82 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.76□□□□□ -1.33
PCDH9-205ENST00000614931 H7C1Q1 480 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 RGS5O15539 181 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 AKR7A2O43488 359 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 CDC14BO60729 498 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 NDUFS7O75251 213 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 CRTAPO75718 401 aaPredicted RBP6.76□□□□□ -1.33
PCDH9-205ENST00000614931 LY6HO94772 140 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 HTR3BO95264 441 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 MPIG6BO95866 241 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 TFF1P04155 84 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 LYNX1P0DP58 116 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 MGMTP16455 207 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 TNFSF8P32971 234 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 CDKN1AP38936 164 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 GATA4P43694 442 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 SRP9P49458 86 aaKnown RBP6.76□□□□□ -1.33
PCDH9-205ENST00000614931 SNU13P55769 128 aaKnown RBP6.76□□□□□ -1.33
PCDH9-205ENST00000614931 GMFBP60983 142 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 ERVK11-1P61568 191 aa6.76□□□□□ -1.33
PCDH9-205ENST00000614931 SNRPD2P62316 118 aaKnown RBP6.76□□□□□ -1.33
PCDH9-205ENST00000614931 RPS27AP62979 156 aaKnown RBP6.76□□□□□ -1.33
PCDH9-205ENST00000614931 PIGYQ3MUY2 71 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms