RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SLC35E2P0CK97 266 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 MYOGP15173 224 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 G6PCP35575 357 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 RHOBP62745 196 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 TMEM183AQ8IXX5 376 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 UTP23Q9BRU9 249 aaKnown RBP12.36□□□□□ -0.43
CHD1-212ENST00000614616 TMEM204Q9BSN7 226 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 MARCH5Q9NX47 278 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 PMCHL2Q9BQD1 86 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 PAAF1Q9BRP4 392 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 PIPOXQ9P0Z9 390 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 SLC25A1P53007 311 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 DEFB110Q30KQ9 67 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 MORN1Q5T089 497 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 C8orf82Q6P1X6 216 aaPredicted RBP12.36□□□□□ -0.43
CHD1-212ENST00000614616 NIT1Q86X76 327 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 CLDN23Q96B33 292 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 ZNF732B4DXR9 585 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 HIST1H1DP16402 221 aaKnown RBP12.36□□□□□ -0.43
CHD1-212ENST00000614616 IL3RAP26951 378 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 IRF3Q14653 427 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 BARX1Q9HBU1 254 aaPredicted RBP12.36□□□□□ -0.43
CHD1-212ENST00000614616 WIPI2Q9Y4P8 454 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 NEURL1O76050 574 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 SMIM17P0DL12 118 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 HMGA2P52926 109 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
CHD1-212ENST00000614616 TRBV11-1A0A0K0K1C0 115 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 C3orf85A0A1B0GTC6 90 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 CDC14CA4D256 554 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 ENSAO43768 121 aaKnown RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 ZFPL1O95159 310 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 EDN1P05305 212 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 FAM87AP0C7U9 286 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 ASCL1P50553 236 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 RPL18Q07020 188 aaKnown RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 NKAIN1Q4KMZ8 207 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 MYADML2A6NDP7 307 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 A8MXK9 166 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 POU3F2P20265 443 aaPredicted RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 H1FOOQ8IZA3 346 aaPredicted RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 TLNRD1Q9H1K6 362 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 SNURFLB1AK76 121 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 GFYI3L273 518 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 PTGESO14684 152 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 APOBEC1P41238 236 aaKnown RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 LCTP09848 1927 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 EN2P19622 333 aaPredicted RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 GAMTQ14353 236 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 NR0B2Q15466 257 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 RNF165Q6ZSG1 346 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 MRPL13Q9BYD1 178 aaKnown RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 VCX2Q9H322 139 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 FAM206AQ9NX38 181 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 HES1Q14469 280 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 Q5PR19 223 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 SLC45A2Q9UMX9 530 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 ST3GAL6Q9Y274 331 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 TMEM131Q92545 1883 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 RPS4Y1P22090 263 aaKnown RBP12.35□□□□□ -0.43
CHD1-212ENST00000614616 TNFRSF9Q07011 255 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 HFEQ30201 348 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 TXNIPQ9H3M7 391 aa12.35□□□□□ -0.43
CHD1-212ENST00000614616 NCKAP5O14513 1909 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 SP6Q3SY56 376 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 GPX7Q96SL4 187 aaPredicted RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 IL19Q9UHD0 177 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 H0YGG7 62 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 CCR2P41597 374 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 PNLIPRP2P54317 469 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 AESQ08117 197 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 ABHD17CQ6PCB6 329 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 CALHM2Q9HA72 323 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 MRPS2Q9Y399 296 aaKnown RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 TNRC6AQ8NDV7 1962 aaKnown RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 LRP5O75197 1615 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 ZNF121P58317 390 aaPredicted RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 OR1C1Q15619 314 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 TAS1R1Q7RTX1 841 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 TSEN54Q7Z6J9 526 aaKnown RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 TRMT61AQ96FX7 289 aaKnown RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 SPACA5Q96QH8 159 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 IGLV3-10A0A075B6K4 115 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 KIR2DS5A0A0G2JLQ3 304 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 A0A0G2JNG1 304 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 KIR2DS3K7RE56 304 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 TIMM8AO60220 97 aaPredicted RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 ZFAND5O76080 213 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 GAPDHP04406 335 aaKnown RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 KIR2DS5Q14953 304 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 D2HGDHQ8N465 521 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms